RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CCDC24Q8N4L8 307 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 CCDC175P0C221 793 aa20.08■□□□□ 0.81
RAB40C-203ENST00000535977 HNRNPH1P31943 449 aaKnown RBP20.08■□□□□ 0.81
RAB40C-203ENST00000535977 LIG3P49916 1009 aa20.08■□□□□ 0.81
RAB40C-203ENST00000535977 STX17P56962 302 aa20.08■□□□□ 0.81
RAB40C-203ENST00000535977 RPN1P04843 607 aaKnown RBP20.08■□□□□ 0.8
RAB40C-203ENST00000535977 STAT6P42226 847 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 NFIXQ14938 502 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 DYNLL2Q96FJ2 89 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 CCSER1Q9C0I3 900 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 MAGEF1Q9HAY2 307 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 CTNND2Q9UQB3 1225 aa20.08■□□□□ 0.8
RAB40C-203ENST00000535977 KARSQ15046 597 aaKnown RBP20.07■□□□□ 0.8
RAB40C-203ENST00000535977 STAG2Q8N3U4 1231 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 MSANTD4Q8NCY6 345 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 CUEDC2Q9H467 287 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 JAG2Q9Y219 1238 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 H7C1D1 291 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 TEX33O43247 280 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
RAB40C-203ENST00000535977 CASP1P29466 404 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 KCNB1Q14721 858 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 KCNV1Q6PIU1 500 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 RPGRQ92834 1020 aaKnown RBP20.07■□□□□ 0.8
RAB40C-203ENST00000535977 FAM163AQ96GL9 167 aaPredicted RBP20.07■□□□□ 0.8
RAB40C-203ENST00000535977 DISC1Q9NRI5 854 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 TAF1LQ8IZX4 1826 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 LY75O60449 1722 aa20.07■□□□□ 0.8
RAB40C-203ENST00000535977 GPR75-ASB3A0A0A6YYF3 556 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 SATB1Q01826 763 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 AK8Q96MA6 479 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 THSD7AQ9UPZ6 1657 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 POTEB2H3BUK9 544 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 IL1R1P14778 569 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 RASA1P20936 1047 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 FECHP22830 423 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 RXRBP28702 533 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 RBL2Q08999 1139 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 FBXW10Q5XX13 1052 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 C16orf86Q6ZW13 317 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 GPKOWQ92917 476 aaPredicted RBP eCLIP20.06■□□□□ 0.8
RAB40C-203ENST00000535977 TMEM47Q9BQJ4 181 aa20.06■□□□□ 0.8
RAB40C-203ENST00000535977 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
RAB40C-203ENST00000535977 IRX2Q9BZI1 471 aaPredicted RBP20.06■□□□□ 0.8
RAB40C-203ENST00000535977 BAZ2BQ9UIF8 2168 aaKnown RBP20.06■□□□□ 0.8
RAB40C-203ENST00000535977 TNRC6CQ9HCJ0 1690 aaKnown RBP20.06■□□□□ 0.8
RAB40C-203ENST00000535977 STXBP3O00186 592 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 ORC2Q13416 577 aaPredicted RBP20.05■□□□□ 0.8
RAB40C-203ENST00000535977 KRT25Q7Z3Z0 450 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 CNPY4Q8N129 248 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 NEDD1Q8NHV4 660 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 MTRQ99707 1265 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 BLZF1Q9H2G9 400 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 USP17L3A6NCW0 530 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 USP17L4A6NCW7 530 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 MFAP3LO75121 409 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 UBA7P41226 1012 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 VSNL1P62760 191 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 STIM1Q13586 685 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 TUBB2AQ13885 445 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 USP17L1Q7RTZ2 530 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 TBC1D22AQ8WUA7 517 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 NELFBQ8WX92 580 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 TUBB2BQ9BVA1 445 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 ZMYND12Q9H0C1 365 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 CD209Q9NNX6 404 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 SBF2Q86WG5 1849 aa20.05■□□□□ 0.8
RAB40C-203ENST00000535977 GNA11P29992 359 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 DIXDC1Q155Q3 683 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 SMYD4Q8IYR2 804 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-203ENST00000535977 RBM17Q96I25 401 aaKnown RBP20.04■□□□□ 0.8
RAB40C-203ENST00000535977 DESI2Q9BSY9 194 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 FAM107BQ9H098 131 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 LRRIQ3A6PVS8 624 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-203ENST00000535977 N4BP3O15049 544 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 RHOXF2BP0C7M4 288 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 KRT31Q15323 416 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 CRY2Q49AN0 593 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 TMTC1Q8IUR5 882 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 RHOXF2Q9BQY4 288 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 GGA1Q9UJY5 639 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 STX8Q9UNK0 236 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 KLRF2D3W0D1 207 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 RNF40O75150 1001 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 BBOX1O75936 387 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 BTDP43251 543 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 TCP11X2Q5H9J9 407 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 AFAP1L1Q8TED9 768 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 STAMQ92783 540 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 C6orf50Q9HD87 102 aa20.04■□□□□ 0.8
RAB40C-203ENST00000535977 CCDC189A1A4V9 331 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 CYTH3O43739 400 aa20.03■□□□□ 0.8
RAB40C-203ENST00000535977 PARP1P09874 1014 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms