RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.46
ATP2C1-224ENST00000533801 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.46
ATP2C1-224ENST00000533801 TTLL1O95922 423 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 SEPT2Q15019 361 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 VEZTQ9HBM0 779 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 PUF60Q9UHX1 559 aaKnown RBP17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 PSMA7O14818 248 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 C21orf2O43822 256 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 TFRCP02786 760 aaKnown RBP17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 NPR1P16066 1061 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 COPB1P53618 953 aaKnown RBP17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 NR1I3Q14994 352 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 NT5DC1Q5TFE4 455 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 RMND1Q9NWS8 449 aa17.89■□□□□ 0.45
ATP2C1-224ENST00000533801 DDTLA6NHG4 134 aaPredicted RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 B4DLN1 442 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 H0YIN7 160 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 RAD17O75943 681 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 NAALADL2Q58DX5 795 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 SLC30A10Q6XR72 485 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 LRRC15Q8TF66 581 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 UBXN4Q92575 508 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 MRPL44Q9H9J2 332 aaKnown RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 TSR1Q2NL82 804 aaKnown RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 ZNF658Q5TYW1 1059 aaPredicted RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 FCHSD1Q86WN1 690 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 LAMB2P55268 1798 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 KRT18P05783 430 aaKnown RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 STK4Q13043 487 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 CERKLQ49MI3 558 aaPredicted RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 SH3RF1Q7Z6J0 888 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 C4orf32Q8N8J7 132 aa17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.88■□□□□ 0.45
ATP2C1-224ENST00000533801 PDE6BP35913 854 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 ZNF569Q5MCW4 686 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 TRIM21P19474 475 aaKnown RBP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 GTF2F1P35269 517 aaKnown RBP eCLIP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 KLK7P49862 253 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 UBXN2AP68543 259 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 TMEM266Q2M3C6 531 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 RAD9BQ6WBX8 426 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 ZMYND12Q9H0C1 365 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 RNF225M0QZC1 329 aaPredicted RBP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 ECE2O60344 883 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 ARL6IP4Q66PJ3 421 aaKnown RBP17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 PSTPIP2Q9H939 334 aa17.87■□□□□ 0.45
ATP2C1-224ENST00000533801 A0A1B0GTH6 734 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 CCDC175P0C221 793 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 NELFCDQ8IXH7 590 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 CTAGE1Q96RT6 745 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 LZTS2Q9BRK4 669 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 PDGFDQ9GZP0 370 aaPredicted RBP17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 SH3GLB2Q9NR46 395 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 GUCA1BQ9UMX6 200 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 PCDHA1Q9Y5I3 950 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 PPIP5K2O43314 1243 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 HOXA13P31271 388 aaPredicted RBP17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 KIF4BQ2VIQ3 1234 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 TCP11X2Q5H9J9 407 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 CCDC94Q9BW85 323 aaPredicted RBP17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 SPZ1Q9BXG8 430 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 JMJD4Q9H9V9 463 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 CCP110O43303 1012 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 MTERF4Q7Z6M4 381 aaKnown RBP17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 MASTLQ96GX5 879 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 SNED1Q8TER0 1413 aa17.86■□□□□ 0.45
ATP2C1-224ENST00000533801 KIF2AO00139 706 aaPredicted RBP17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 ABL1P00519 1130 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 HOXA10P31260 410 aaPredicted RBP17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 SHMT1P34896 483 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 STAT3P40763 770 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 EN1Q05925 392 aaPredicted RBP17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 APOBEC3HQ6NTF7 200 aaKnown RBP17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 REXO1L1PQ8IX06 675 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■□□□□ 10.5
ATP2C1-224ENST00000533801 SCN7AQ01118 1682 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 GYPCP04921 128 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 KRT79Q5XKE5 535 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 SLFN13Q68D06 897 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 ICA1Q05084 483 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 FBXO38Q6PIJ6 1188 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 MIGA2Q7L4E1 593 aa17.85■□□□□ 0.45
ATP2C1-224ENST00000533801 MEIS1O00470 390 aa17.84■□□□□ 0.45
ATP2C1-224ENST00000533801 SV2BQ7L1I2 683 aa17.84■□□□□ 0.45
ATP2C1-224ENST00000533801 CHP1Q99653 195 aa17.84■□□□□ 0.45
ATP2C1-224ENST00000533801 PODXL2Q9NZ53 605 aa17.84■□□□□ 0.45
ATP2C1-224ENST00000533801 DDX25Q9UHL0 483 aaKnown RBP17.84■□□□□ 0.45
ATP2C1-224ENST00000533801 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms