RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 RRP36Q96EU6 259 aaKnown RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-231ENST00000529540 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 EMILIN3Q9NT22 766 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
NR1H3-231ENST00000529540 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-231ENST00000529540 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 PLEKHA8P1O95397 391 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 GOLGA8HP0CJ92 632 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-231ENST00000529540 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 SRBD1Q8N5C6 995 aaKnown RBP16.61■□□□□ 0.25
NR1H3-231ENST00000529540 SLC26A6Q9BXS9 759 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-231ENST00000529540 MYPNQ86TC9 1320 aa16.61■□□□□ 0.25
NR1H3-231ENST00000529540 TMEM232C9JQI7 657 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 CETPP11597 493 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 FUT2Q10981 343 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 RGMBQ6NW40 437 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 LRRC8AQ8IWT6 810 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 PRPF38AQ8NAV1 312 aaKnown RBP16.6■□□□□ 0.25
NR1H3-231ENST00000529540 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L15C9J2P7 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 SYDE2Q5VT97 1194 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 SPRYD7Q5W111 196 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 NYAP1Q6ZVC0 841 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 PHKBQ93100 1093 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 TANGO6Q9C0B7 1094 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 RPAP3Q9H6T3 665 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 GABPB1Q06547 395 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 C11orf57Q6ZUT1 292 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 CCDC12Q8WUD4 166 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-231ENST00000529540 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 SLF1Q9BQI6 1058 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 ANO10Q9NW15 660 aa16.59■□□□□ 0.25
NR1H3-231ENST00000529540 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-231ENST00000529540 TRIM29Q14134 588 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-231ENST00000529540 KIAA1755Q5JYT7 1200 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
NR1H3-231ENST00000529540 ADGRF4Q8IZF3 695 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 NUP88Q99567 741 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-231ENST00000529540 CREBZFQ9NS37 354 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 DDX41Q9UJV9 622 aaKnown RBP16.58■□□□□ 0.24
NR1H3-231ENST00000529540 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 AGTPBP1Q9UPW5 1226 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-231ENST00000529540 LOC285556D6RIA3 1793 aa16.58■□□□□ 0.24
NR1H3-231ENST00000529540 PNMA6FA0A0J9YX94 578 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-231ENST00000529540 ZBTB5O15062 677 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 CYTH3O43739 400 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 FLOT1O75955 427 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 SCG2P13521 617 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 APLP1P51693 650 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 INHBEP58166 350 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 COG2Q14746 738 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 CMTR1Q8N1G2 835 aaKnown RBP16.57■□□□□ 0.24
NR1H3-231ENST00000529540 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 SH3GLB2Q9NR46 395 aa16.57■□□□□ 0.24
NR1H3-231ENST00000529540 ZHX1Q9UKY1 873 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-231ENST00000529540 MANSC4A6NHS7 340 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 CCZ1BP86790 482 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 CATSPERGQ6ZRH7 1159 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 RASAL3Q86YV0 1011 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 DHX40Q8IX18 779 aaKnown RBP16.56■□□□□ 0.24
NR1H3-231ENST00000529540 CCDC148Q8NFR7 591 aa16.56■□□□□ 0.24
NR1H3-231ENST00000529540 GTF3C2Q8WUA4 911 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms