RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 ZNF543Q08ER8 600 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 TDHQ8IZJ6 230 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 FGD4Q96M96 766 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 ZSCAN10Q96SZ4 725 aaPredicted RBP12.78□□□□□ -0.36
PVT1-216ENST00000523068 KAT14Q9H8E8 782 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 CYP39A1Q9NYL5 469 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
PVT1-216ENST00000523068 A0A1W2PQ45 241 aaPredicted RBP12.77□□□□□ -0.37
PVT1-216ENST00000523068 A0A1W2PQY0 241 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
PVT1-216ENST00000523068 CCDC144BQ3MJ40 725 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 MUM1L1Q5H9M0 696 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 PCSK9Q8NBP7 692 aaKnown RBP12.77□□□□□ -0.37
PVT1-216ENST00000523068 PNMA1Q8ND90 353 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 ANKS1AQ92625 1134 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 UBAC1Q9BSL1 405 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 ZSWIM5Q9P217 1185 aa12.77□□□□□ -0.37
PVT1-216ENST00000523068 ADD3Q9UEY8 706 aaKnown RBP12.77□□□□□ -0.37
PVT1-216ENST00000523068 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 C6orf222P0C671 652 aaPredicted RBP12.76□□□□□ -0.37
PVT1-216ENST00000523068 CHMLP26374 656 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
PVT1-216ENST00000523068 TRDNQ13061 729 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
PVT1-216ENST00000523068 TRIM60Q495X7 471 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 KLHDC9Q8NEP7 349 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
PVT1-216ENST00000523068 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
PVT1-216ENST00000523068 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
PVT1-216ENST00000523068 TNKSO95271 1327 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
PVT1-216ENST00000523068 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 ACLYP53396 1101 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 GJA9P57773 515 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 KCNA10Q16322 511 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 ENAHQ8N8S7 591 aaPredicted RBP12.75□□□□□ -0.37
PVT1-216ENST00000523068 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
PVT1-216ENST00000523068 IL25Q9H293 177 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
PVT1-216ENST00000523068 STARD7Q9NQZ5 370 aa12.75□□□□□ -0.37
PVT1-216ENST00000523068 ELP1O95163 1332 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 B4DLN1 442 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 NFIBO00712 420 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 PARP1P09874 1014 aaKnown RBP12.74□□□□□ -0.37
PVT1-216ENST00000523068 GOLGA8HP0CJ92 632 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 MRPL12P52815 198 aaKnown RBP12.74□□□□□ -0.37
PVT1-216ENST00000523068 BAATQ14032 418 aaPredicted RBP12.74□□□□□ -0.37
PVT1-216ENST00000523068 GNASQ5JWF2 1037 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 IFIT1BQ5T764 474 aaKnown RBP12.74□□□□□ -0.37
PVT1-216ENST00000523068 IQSEC1Q6DN90 963 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 NOL8Q76FK4 1167 aaKnown RBP12.74□□□□□ -0.37
PVT1-216ENST00000523068 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 TOX2Q96NM4 488 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 MAF1Q9H063 256 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 PDLIM7Q9NR12 457 aa12.74□□□□□ -0.37
PVT1-216ENST00000523068 SZT2Q5T011 3432 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 ASTN1O14525 1302 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 SGSM2O43147 1006 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 ADCY6O43306 1168 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 ASGR1P07306 291 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 CLTBP09497 229 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 ALDH5A1P51649 535 aaPredicted RBP12.73□□□□□ -0.37
PVT1-216ENST00000523068 NKX3-2P78367 333 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 TLE2Q04725 743 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 CCSAPQ6IQ19 270 aaPredicted RBP12.73□□□□□ -0.37
PVT1-216ENST00000523068 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 VTI1AQ96AJ9 217 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 AP5M1Q9H0R1 490 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 Q9Y3F1 56 aa12.73□□□□□ -0.37
PVT1-216ENST00000523068 ABCB11O95342 1321 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 ERICH2A1L162 156 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 MYADML2A6NDP7 307 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 ZEB2O60315 1214 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 PQBP1O60828 265 aaKnown RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 CYP21A2P08686 494 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 CALML3P27482 149 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 USH1GQ495M9 461 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 ANKRD33Q7Z3H0 272 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 RALYLQ86SE5 291 aaKnown RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 TLK2Q86UE8 772 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms