RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 NBPF9Q3BBW0 867 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 ASPRV1Q53RT3 343 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 NT5DC1Q5TFE4 455 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 KRBA2Q6ZNG9 492 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 METTL16Q86W50 562 aaKnown RBP20.66■□□□□ 0.9
SDC2-202ENST00000518385 ZSCAN29Q8IWY8 852 aaPredicted RBP20.66■□□□□ 0.9
SDC2-202ENST00000518385 BLIDQ8IZY5 108 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 ENOX1Q8TC92 643 aaKnown RBP20.66■□□□□ 0.9
SDC2-202ENST00000518385 HSD3B7Q9H2F3 369 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 RNF181Q9P0P0 153 aa20.66■□□□□ 0.9
SDC2-202ENST00000518385 MAP3K9P80192 1104 aa20.65■□□□□ 0.9
SDC2-202ENST00000518385 BARHL2Q9NY43 387 aa20.65■□□□□ 0.9
SDC2-202ENST00000518385 PSD3Q9NYI0 1048 aa20.65■□□□□ 0.9
SDC2-202ENST00000518385 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.65■□□□□ 0.95e-18■□□□□ 8.1
SDC2-202ENST00000518385 PPP2R2CQ9Y2T4 447 aa20.65■□□□□ 0.9
SDC2-202ENST00000518385 H7C1D1 291 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 SOCS7O14512 581 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 TTLL1O95922 423 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 MYH8P13535 1937 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 SHMT1P34896 483 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 BRD3Q15059 726 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 GPR162Q16538 588 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 TTC38Q5R3I4 469 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 FAM83AQ86UY5 434 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 CLIC6Q96NY7 704 aa20.64■□□□□ 0.9
SDC2-202ENST00000518385 CNTNAP1P78357 1384 aa20.64■□□□□ 0.89
SDC2-202ENST00000518385 URI1O94763 535 aaPredicted RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 EGFRP00533 1210 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 SNHG28P0DPA3 235 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 MUM1L1Q5H9M0 696 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 RBM26Q5T8P6 1007 aaKnown RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 SAMD7Q7Z3H4 446 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 RRP36Q96EU6 259 aaKnown RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 BAG1Q99933 345 aaPredicted RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 PYM1Q9BRP8 204 aaKnown RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 GPRC5DQ9NZD1 345 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 CYTH3O43739 400 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 ERCC5P28715 1186 aaPredicted RBP20.63■□□□□ 0.89
SDC2-202ENST00000518385 PLA2G4AP47712 749 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 TMEM139Q8IV31 216 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 CNNM3Q8NE01 707 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 RIOX1Q9H6W3 641 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 DNAJC18Q9H819 358 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 VEZTQ9HBM0 779 aa20.63■□□□□ 0.89
SDC2-202ENST00000518385 SIPA1L1O43166 1804 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 BIN1O00499 593 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 AKR1B1P15121 316 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 GNA11P29992 359 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 ATP2C1P98194 919 aaPredicted RBP20.62■□□□□ 0.89
SDC2-202ENST00000518385 TBC1D10BQ4KMP7 808 aaPredicted RBP20.62■□□□□ 0.89
SDC2-202ENST00000518385 ARL6IP4Q66PJ3 421 aaKnown RBP20.62■□□□□ 0.89
SDC2-202ENST00000518385 SPECC1LQ69YQ0 1117 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 RSRC2Q7L4I2 434 aaKnown RBP20.62■□□□□ 0.89
SDC2-202ENST00000518385 GOLGA1Q92805 767 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 PANX2Q96RD6 677 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 ARFGAP3Q9NP61 516 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 SEC63Q9UGP8 760 aaKnown RBP20.62■□□□□ 0.89
SDC2-202ENST00000518385 MRFAP1Q9Y605 127 aa20.62■□□□□ 0.89
SDC2-202ENST00000518385 ESYT2A0FGR8 921 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 M0R2N6 131 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 STXBP3O00186 592 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 GRIN3BO60391 1043 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 KIF4BQ2VIQ3 1234 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 TATDN1Q6P1N9 297 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 CCDC51Q96ER9 411 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 CSRNP1Q96S65 589 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 ZMYND12Q9H0C1 365 aa20.61■□□□□ 0.89
SDC2-202ENST00000518385 GREB1LQ9C091 1923 aaPredicted RBP20.61■□□□□ 0.89
SDC2-202ENST00000518385 CCDC151A5D8V7 595 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 VWA3AA6NCI4 1184 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 PDHBP11177 359 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 ZNF18P17022 549 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 SLC35G1Q2M3R5 365 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 EARS2Q5JPH6 523 aaKnown RBP20.6■□□□□ 0.89
SDC2-202ENST00000518385 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 HNRNPLLQ8WVV9 542 aaKnown RBP20.6■□□□□ 0.89
SDC2-202ENST00000518385 TRIM34Q9BYJ4 488 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 C6orf50Q9HD87 102 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
SDC2-202ENST00000518385 CCDC194A0A1B0GVG4 234 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 DDNO94850 711 aaPredicted RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 SLURP2P0DP57 97 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 ATP2B1P20020 1258 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 TNNI2P48788 182 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 GPATCH4Q5T3I0 446 aaKnown RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 CC2D1AQ6P1N0 951 aaPredicted RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 PIK3AP1Q6ZUJ8 805 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 CEP112Q8N8E3 955 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 ERCC4Q92889 916 aaPredicted RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 MKL1Q969V6 931 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 CARD6Q9BX69 1037 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 HERC5Q9UII4 1024 aaKnown RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 A0A087WWV3 80 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 TULP2O00295 520 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 LAD1O00515 517 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 ATP1A3P13637 1013 aa20.59■□□□□ 0.89
SDC2-202ENST00000518385 SARSP49591 514 aaKnown RBP20.59■□□□□ 0.89
SDC2-202ENST00000518385 MDM2Q00987 491 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms