RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 MAP3K19Q56UN5 1328 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 TOM1O60784 492 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 TIAF1O95411 115 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 NEFMP07197 916 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 ADH5P11766 374 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 RAC1P63000 192 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 NCAPHQ15003 741 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 PRRT3Q5FWE3 981 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 AKAP4Q5JQC9 854 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 SPATC1Q76KD6 591 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 KLHL6Q8WZ60 621 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 ATXN3LQ9H3M9 355 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 FBRSQ9HAH7 460 aa9.16□□□□□ -0.94
RFC1-213ENST00000512275 ZNF214Q9UL59 606 aaPredicted RBP9.16□□□□□ -0.94
RFC1-213ENST00000512275 COL18A1P39060 1754 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 DIAPH1O60610 1272 aaKnown RBP9.15□□□□□ -0.94
RFC1-213ENST00000512275 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
RFC1-213ENST00000512275 CAP2P40123 477 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 CCNFP41002 786 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 GATA4P43694 442 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
RFC1-213ENST00000512275 SQSTM1Q13501 440 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 C2orf27AQ580R0 203 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 SLC6A19Q695T7 634 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 VHLLQ6RSH7 139 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.15□□□□□ -0.94
RFC1-213ENST00000512275 HID1Q8IV36 788 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 FAM13CQ8NE31 585 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 ZNF507Q8TCN5 953 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 FANCLQ9NW38 375 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 ZMYM5Q9UJ78 669 aa9.15□□□□□ -0.94
RFC1-213ENST00000512275 FLT4P35916 1363 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 PNPLA6Q8IY17 1366 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 ESYT3A0FGR9 886 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 FAM229AH3BQW9 127 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 CDC45O75419 566 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 AMPHP49418 695 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 CHMP4BP1P59074 171 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 NKG7Q16617 165 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 UBE3DQ7Z6J8 389 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 CCDC146Q8IYE0 955 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 KCNH5Q8NCM2 988 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 THAP3Q8WTV1 239 aaPredicted RBP9.14□□□□□ -0.95
RFC1-213ENST00000512275 PCDHB10Q9UN67 800 aa9.14□□□□□ -0.95
RFC1-213ENST00000512275 RTL1A6NKG5 1358 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 INSRP06213 1382 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.13□□□□□ -0.95
RFC1-213ENST00000512275 RAG1P15918 1043 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 ITGB7P26010 798 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 SOX4Q06945 474 aaPredicted RBP9.13□□□□□ -0.95
RFC1-213ENST00000512275 SLBPQ14493 270 aaKnown RBP eCLIP9.13□□□□□ -0.95
RFC1-213ENST00000512275 TTLL4Q14679 1199 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 IGF2-ASQ6U949 168 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 KIAA0907Q7Z7F0 614 aaPredicted RBP9.13□□□□□ -0.95
RFC1-213ENST00000512275 Q8N3U1 123 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 APPBP2Q92624 585 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 PICK1Q9NRD5 415 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 AP4E1Q9UPM8 1137 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 LEMD3Q9Y2U8 911 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 DLG5Q8TDM6 1919 aa9.13□□□□□ -0.95
RFC1-213ENST00000512275 RGS13O14921 159 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 UBOX5O94941 541 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 CLSTN1O94985 981 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 GCP02774 474 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 U2AF1L5P0DN76 240 aaPredicted RBP9.12□□□□□ -0.95
RFC1-213ENST00000512275 ELNP15502 786 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 HOXC9P31274 260 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 U2AF1Q01081 240 aaKnown RBP eCLIP9.12□□□□□ -0.95
RFC1-213ENST00000512275 SLC10A6Q3KNW5 377 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 ANKRD13AQ8IZ07 590 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 LTV1Q96GA3 475 aaPredicted RBP9.12□□□□□ -0.95
RFC1-213ENST00000512275 GPATCH3Q96I76 525 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
RFC1-213ENST00000512275 SEMA6BQ9H3T3 888 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 NUDCQ9Y266 331 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 PLCH1Q4KWH8 1693 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 LMO7Q8WWI1 1683 aa9.12□□□□□ -0.95
RFC1-213ENST00000512275 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
RFC1-213ENST00000512275 KDM2BQ8NHM5 1336 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 FAM86C2PA6NEL3 165 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 SUSD5O60279 629 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 APBA3O96018 575 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 IL13P35225 146 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 PMS1P54277 932 aaKnown RBP9.11□□□□□ -0.95
RFC1-213ENST00000512275 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 SSRP1Q08945 709 aaKnown RBP9.11□□□□□ -0.95
RFC1-213ENST00000512275 EIF4A2Q14240 407 aaKnown RBP9.11□□□□□ -0.95
RFC1-213ENST00000512275 KIAA1211LQ6NV74 962 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 PPFIBP1Q86W92 1011 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 TMEM192Q8IY95 271 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 KCT2Q8NC54 265 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 ISL2Q96A47 359 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 KRTAP9-2Q9BYQ4 174 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 EPN3Q9H201 632 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms