RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NSMFQ6X4W1 530 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 SLC30A10Q6XR72 485 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
SNF8-206ENST00000509989 FAM133AQ8N9E0 248 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 KCNB2Q92953 911 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 CYP39A1Q9NYL5 469 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 ZNF865P0CJ78 1059 aaPredicted RBP15.84■□□□□ 0.13
SNF8-206ENST00000509989 MCM5P33992 734 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 HSPA4P34932 840 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 COPB2P35606 906 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 BAATQ14032 418 aaPredicted RBP15.84■□□□□ 0.13
SNF8-206ENST00000509989 TMEM63BQ5T3F8 832 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 ZNF654Q8IZM8 581 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 PAWRQ96IZ0 340 aaKnown RBP15.84■□□□□ 0.13
SNF8-206ENST00000509989 NEK1Q96PY6 1258 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 OGDHLQ9ULD0 1010 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 BRPF3Q9ULD4 1205 aa15.84■□□□□ 0.13
SNF8-206ENST00000509989 OPLAHO14841 1288 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 DHX16O60231 1041 aaKnown RBP15.83■□□□□ 0.12
SNF8-206ENST00000509989 FARP2O94887 1054 aaPredicted RBP15.83■□□□□ 0.12
SNF8-206ENST00000509989 PLEKHA8P1O95397 391 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 TSGA10IPQ3SY00 556 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 MTMR8Q96EF0 704 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 PIGSQ96S52 555 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 KATNBL1Q9H079 304 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 COL20A1Q9P218 1284 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 FBXO40Q9UH90 709 aa15.83■□□□□ 0.12
SNF8-206ENST00000509989 DDX20Q9UHI6 824 aaKnown RBP15.83■□□□□ 0.12
SNF8-206ENST00000509989 DIS3Q9Y2L1 958 aaKnown RBP15.83■□□□□ 0.12
SNF8-206ENST00000509989 ERICH2A1L162 156 aa15.82■□□□□ 0.12
SNF8-206ENST00000509989 POTEB2H3BUK9 544 aa15.82■□□□□ 0.12
SNF8-206ENST00000509989 SEC24BO95487 1268 aa15.82■□□□□ 0.12
SNF8-206ENST00000509989 TKFCQ3LXA3 575 aa15.82■□□□□ 0.12
SNF8-206ENST00000509989 USP26Q9BXU7 913 aa15.82■□□□□ 0.12
SNF8-206ENST00000509989 CEP290O15078 2479 aa15.82■□□□□ 0.12
SNF8-206ENST00000509989 hCG_1642624A0A1W2PR95 340 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 PFASO15067 1338 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 CALML3P27482 149 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 MAMDC4Q6UXC1 1216 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 ARMCX2Q7L311 632 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 WDR19Q8NEZ3 1342 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 JAKMIP1Q96N16 626 aaKnown RBP15.81■□□□□ 0.12
SNF8-206ENST00000509989 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.81■□□□□ 0.12
SNF8-206ENST00000509989 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
SNF8-206ENST00000509989 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 PTPDC1A2A3K4 754 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 RPS6P62753 249 aaKnown RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 SART3Q15020 963 aaKnown RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 GJC2Q5T442 439 aaPredicted RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 NFXL1Q6ZNB6 911 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 DHX32Q7L7V1 743 aaKnown RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 EEPD1Q7L9B9 569 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 SRBD1Q8N5C6 995 aaKnown RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 TMEM87BQ96K49 555 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 ZHX1Q9UKY1 873 aaPredicted RBP15.8■□□□□ 0.12
SNF8-206ENST00000509989 KIAA1217Q5T5P2 1943 aa15.8■□□□□ 0.12
SNF8-206ENST00000509989 MYADML2A6NDP7 307 aa15.79■□□□□ 0.12
SNF8-206ENST00000509989 SEPT4O43236 478 aa15.79■□□□□ 0.12
SNF8-206ENST00000509989 LIFRP42702 1097 aa15.79■□□□□ 0.12
SNF8-206ENST00000509989 ZNF467Q7Z7K2 595 aaPredicted RBP15.79■□□□□ 0.12
SNF8-206ENST00000509989 FBXO11Q86XK2 927 aa15.79■□□□□ 0.12
SNF8-206ENST00000509989 DNAH12Q6ZR08 3092 aa15.79■□□□□ 0.12
SNF8-206ENST00000509989 SYNGAP1Q96PV0 1343 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 CCDC69A6NI79 296 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 ZBTB5O15062 677 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 DDAH1O94760 285 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 PGK1P00558 417 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 COL6A1P12109 1028 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 APOBRQ0VD83 1088 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 ACVR2BQ13705 512 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 RNF207Q6ZRF8 634 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 Q6ZUG5 572 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 SGMS1Q86VZ5 419 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 FBXO16Q8IX29 292 aaPredicted RBP15.78■□□□□ 0.12
SNF8-206ENST00000509989 CCDC82Q8N4S0 544 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 TAAR1Q96RJ0 339 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
SNF8-206ENST00000509989 FAM217BQ9NTX9 383 aaPredicted RBP15.78■□□□□ 0.12
SNF8-206ENST00000509989 DOCK5Q9H7D0 1870 aa15.78■□□□□ 0.12
SNF8-206ENST00000509989 ABCB11O95342 1321 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 MYH7BA7E2Y1 1941 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 REC8O95072 547 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
SNF8-206ENST00000509989 ADCYAP1R1P41586 468 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 ALDH5A1P51649 535 aaPredicted RBP15.77■□□□□ 0.12
SNF8-206ENST00000509989 CCDC144BQ3MJ40 725 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 APOA5Q6Q788 366 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 SYTL5Q8TDW5 730 aaPredicted RBP15.77■□□□□ 0.12
SNF8-206ENST00000509989 MTA3Q9BTC8 594 aa15.77■□□□□ 0.12
SNF8-206ENST00000509989 KLF18A0A0U1RQI7 1052 aa15.76■□□□□ 0.11
SNF8-206ENST00000509989 DTNBO60941 627 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms