RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 ACVR2BQ13705 512 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 SKIV2LQ15477 1246 aaKnown RBP6.97□□□□□ -1.29
KDM3B-205ENST00000508386 CCDC144BQ3MJ40 725 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 GNASQ5JWF2 1037 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 PPP2R2DQ66LE6 453 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 CXCL17Q6UXB2 119 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 ZNF454Q8N9F8 522 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 DDX12PQ92771 950 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 SCLYQ96I15 445 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 NOC4LQ9BVI4 516 aaKnown RBP6.97□□□□□ -1.29
KDM3B-205ENST00000508386 CCDC8Q9H0W5 538 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-205ENST00000508386 VCPKMTQ9H867 229 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-205ENST00000508386 ZHX1Q9UKY1 873 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-205ENST00000508386 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 PCDHA11Q9Y5I1 949 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 ZFHX2Q9C0A1 2572 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-205ENST00000508386 TET1Q8NFU7 2136 aa6.97□□□□□ -1.29
KDM3B-205ENST00000508386 ZDBF2Q9HCK1 2354 aa6.96□□□□□ -1.29
KDM3B-205ENST00000508386 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 TCRBV5S4A2TA0A5A2 114 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 PRKAB2O43741 272 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 B4GALT4O60513 344 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 CHGBP05060 677 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-205ENST00000508386 GNAI3P08754 354 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 NHLH1Q02575 133 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 TAP1Q03518 808 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 GRB10Q13322 594 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 KCTD2Q14681 263 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 CCDC158Q5M9N0 1113 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 SMYD5Q6GMV2 418 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 CCDC174Q6PII3 467 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 TMEM179Q6ZVK1 233 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 SDR42E1Q8WUS8 393 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 NUP88Q99567 741 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-205ENST00000508386 EPAS1Q99814 870 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 API5Q9BZZ5 524 aaKnown RBP6.96□□□□□ -1.3
KDM3B-205ENST00000508386 HIPK3Q9H422 1215 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 DCP1AQ9NPI6 582 aaPredicted RBP6.96□□□□□ -1.3
KDM3B-205ENST00000508386 MCM9Q9NXL9 1143 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 GNEQ9Y223 722 aaKnown RBP6.96□□□□□ -1.3
KDM3B-205ENST00000508386 CNPY2Q9Y2B0 182 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 CACNA1AO00555 2505 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 CACNA1HO95180 2353 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 DCHS1Q96JQ0 3298 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 MYO7AQ13402 2215 aa6.96□□□□□ -1.3
KDM3B-205ENST00000508386 SCN5AQ14524 2016 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 GRXCR2A6NFK2 248 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 APBB1O00213 710 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 TULP1O00294 542 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 WDR46O15213 610 aaKnown RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 IGSF3O75054 1194 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 BCAR3O75815 825 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 EEF2P13639 858 aaKnown RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 ATP2A2P16615 1042 aaKnown RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 MLLT3P42568 568 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 RARSP54136 660 aaKnown RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PSMC6P62333 389 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 CNTN2Q02246 1040 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 ICA1Q05084 483 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 ITGA7Q13683 1181 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 GPNMBQ14956 572 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 AAK1Q2M2I8 961 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 FAM83BQ5T0W9 1011 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 TYW1BQ6NUM6 668 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 LCORLQ8N3X6 602 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 MSL3Q8N5Y2 521 aaKnown RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PCSK9Q8NBP7 692 aaKnown RBP6.95□□□□□ -1.3
KDM3B-205ENST00000508386 SSH3Q8TE77 659 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PPP1R13LQ8WUF5 828 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 ARNTL2Q8WYA1 636 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 HLA-CQ95604 372 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PHOX2BQ99453 314 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PDGFCQ9NRA1 345 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 COG5Q9UP83 839 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 HDAC5Q9UQL6 1122 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PCDHGA10Q9Y5H3 936 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 MROH7Q68CQ1 1323 aa6.95□□□□□ -1.3
KDM3B-205ENST00000508386 PTPRZ1P23471 2315 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-205ENST00000508386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-205ENST00000508386 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 LCHNA4D1U4 455 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 SOWAHBA6NEL2 793 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 PRR33A8MZF0 331 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 GNAI2P04899 355 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 CYP2C9P11712 490 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 PDE6AP16499 860 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 CDK8P49336 464 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 ATP8B2P98198 1209 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 TMEM67Q5HYA8 995 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 ARMCX2Q7L311 632 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 TMCO2Q7Z6W1 182 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-205ENST00000508386 FAM178BQ8IXR5 827 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms