RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ZNF543Q08ER8 600 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 DGKHQ86XP1 1220 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 TRIM43Q96BQ3 446 aaPredicted RBP23.19■■□□□ 1.3
SFXN1-203ENST00000502393 TOX2Q96NM4 488 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 UPF3AQ9H1J1 476 aaKnown RBP23.19■■□□□ 1.3
SFXN1-203ENST00000502393 PNMA2Q9UL42 364 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 LTBP2Q14767 1821 aa23.19■■□□□ 1.3
SFXN1-203ENST00000502393 CLTBP09497 229 aa23.18■■□□□ 1.3
SFXN1-203ENST00000502393 CCDC178Q5BJE1 867 aa23.18■■□□□ 1.3
SFXN1-203ENST00000502393 ANKRD33Q7Z3H0 272 aa23.18■■□□□ 1.3
SFXN1-203ENST00000502393 SH3RF1Q7Z6J0 888 aa23.18■■□□□ 1.3
SFXN1-203ENST00000502393 IQCA1Q86XH1 822 aa23.18■■□□□ 1.3
SFXN1-203ENST00000502393 BADQ92934 168 aa23.18■■□□□ 1.3
SFXN1-203ENST00000502393 ELP1O95163 1332 aa23.17■■□□□ 1.3
SFXN1-203ENST00000502393 MYADML2A6NDP7 307 aa23.17■■□□□ 1.3
SFXN1-203ENST00000502393 NKX3-2P78367 333 aa23.17■■□□□ 1.3
SFXN1-203ENST00000502393 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
SFXN1-203ENST00000502393 GLT1D1Q96MS3 346 aa23.17■■□□□ 1.3
SFXN1-203ENST00000502393 CTNNA3Q9UI47 895 aa23.17■■□□□ 1.3
SFXN1-203ENST00000502393 ASTN1O14525 1302 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 PQBP1O60828 265 aaKnown RBP23.16■■□□□ 1.3
SFXN1-203ENST00000502393 ASGR1P07306 291 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 TNFAIP2Q03169 654 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 IMMTQ16891 758 aaKnown RBP23.16■■□□□ 1.3
SFXN1-203ENST00000502393 GNASQ5JWF2 1037 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 GPATCH4Q5T3I0 446 aaKnown RBP23.16■■□□□ 1.3
SFXN1-203ENST00000502393 DEFB123Q8N688 67 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 ZKSCAN3Q9BRR0 538 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 MCM3APO60318 1980 aa23.16■■□□□ 1.3
SFXN1-203ENST00000502393 DCDC2CA8MYV0 355 aa23.15■■□□□ 1.3
SFXN1-203ENST00000502393 KIAA0355O15063 1070 aa23.15■■□□□ 1.3
SFXN1-203ENST00000502393 KDM4AO75164 1064 aa23.15■■□□□ 1.3
SFXN1-203ENST00000502393 ADD3Q9UEY8 706 aaKnown RBP23.15■■□□□ 1.3
SFXN1-203ENST00000502393 LAMA4Q16363 1823 aa23.15■■□□□ 1.3
SFXN1-203ENST00000502393 MROH7Q68CQ1 1323 aa23.14■■□□□ 1.3
SFXN1-203ENST00000502393 LOC102724159A0A0B4J2E5 919 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.14■■□□□ 1.29
SFXN1-203ENST00000502393 PDE4AP27815 886 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 IRX5P78411 483 aaPredicted RBP23.14■■□□□ 1.29
SFXN1-203ENST00000502393 FAAP100Q0VG06 881 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 BAATQ14032 418 aaPredicted RBP23.14■■□□□ 1.29
SFXN1-203ENST00000502393 PWP2Q15269 919 aaKnown RBP23.14■■□□□ 1.29
SFXN1-203ENST00000502393 IQSEC1Q6DN90 963 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 NOL8Q76FK4 1167 aaKnown RBP23.14■■□□□ 1.29
SFXN1-203ENST00000502393 MORC4Q8TE76 937 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 ANKS1AQ92625 1134 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 TMEM39AQ9NV64 488 aa23.14■■□□□ 1.29
SFXN1-203ENST00000502393 GNEQ9Y223 722 aaKnown RBP23.14■■□□□ 1.29
SFXN1-203ENST00000502393 WDR19Q8NEZ3 1342 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 NFIBO00712 420 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 CTAGE5O15320 804 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 TTC22Q5TAA0 569 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 ZSCAN10Q96SZ4 725 aaPredicted RBP23.13■■□□□ 1.29
SFXN1-203ENST00000502393 KAT14Q9H8E8 782 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 CNNM2Q9H8M5 875 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 VTA1Q9NP79 307 aa23.13■■□□□ 1.29
SFXN1-203ENST00000502393 LAMA2P24043 3122 aaKnown RBP23.12■■□□□ 1.29
SFXN1-203ENST00000502393 PTPDC1A2A3K4 754 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 B4E1Z4 1266 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
SFXN1-203ENST00000502393 RAG1P15918 1043 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 ITGB8P26012 769 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 CDK7P50613 346 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 SHHQ15465 462 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 TAPT1Q6NXT6 567 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 PNMA1Q8ND90 353 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 CLEC4DQ8WXI8 215 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 VTI1AQ96AJ9 217 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 PURBQ96QR8 312 aaKnown RBP23.12■■□□□ 1.29
SFXN1-203ENST00000502393 KRT23Q9C075 422 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 ZSWIM5Q9P217 1185 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 Q9Y3F1 56 aa23.12■■□□□ 1.29
SFXN1-203ENST00000502393 A0A0U1RQG5 324 aaPredicted RBP23.11■■□□□ 1.29
SFXN1-203ENST00000502393 SMPD1P17405 629 aa23.11■■□□□ 1.29
SFXN1-203ENST00000502393 ALDH5A1P51649 535 aaPredicted RBP23.11■■□□□ 1.29
SFXN1-203ENST00000502393 Q7L0L9 218 aa23.11■■□□□ 1.29
SFXN1-203ENST00000502393 EEPD1Q7L9B9 569 aa23.11■■□□□ 1.29
SFXN1-203ENST00000502393 TLK2Q86UE8 772 aa23.11■■□□□ 1.29
SFXN1-203ENST00000502393 FBXO16Q8IX29 292 aaPredicted RBP23.11■■□□□ 1.29
SFXN1-203ENST00000502393 AP5M1Q9H0R1 490 aa23.11■■□□□ 1.29
SFXN1-203ENST00000502393 PDGFCQ9NRA1 345 aa23.11■■□□□ 1.29
SFXN1-203ENST00000502393 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
SFXN1-203ENST00000502393 ARVCFO00192 962 aa23.1■■□□□ 1.29
SFXN1-203ENST00000502393 GOLGA8HP0CJ92 632 aa23.1■■□□□ 1.29
SFXN1-203ENST00000502393 C9orf50Q5SZB4 431 aa23.1■■□□□ 1.29
SFXN1-203ENST00000502393 FAM109BQ6ICB4 259 aaPredicted RBP23.1■■□□□ 1.29
SFXN1-203ENST00000502393 RNF207Q6ZRF8 634 aa23.1■■□□□ 1.29
SFXN1-203ENST00000502393 ENAHQ8N8S7 591 aaPredicted RBP23.1■■□□□ 1.29
SFXN1-203ENST00000502393 IL25Q9H293 177 aa23.1■■□□□ 1.29
SFXN1-203ENST00000502393 MTMR10Q9NXD2 777 aa23.1■■□□□ 1.29
SFXN1-203ENST00000502393 RAD50Q92878 1312 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 COL6A3P12111 3177 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 LRRC37A2A6NM11 1700 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 DYNC1LI2O43237 492 aaPredicted RBP23.09■■□□□ 1.29
SFXN1-203ENST00000502393 ZEB2O60315 1214 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 CABYRO75952 493 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 BEX3Q00994 111 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 FSCN1Q16658 493 aaKnown RBP23.09■■□□□ 1.29
SFXN1-203ENST00000502393 KIAA1211Q6ZU35 1233 aa23.09■■□□□ 1.29
SFXN1-203ENST00000502393 UBA5Q9GZZ9 404 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms