RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 ARFGAP3Q9NP61 516 aa16.39■□□□□ 0.21
NEAT1-201ENST00000499732 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
NEAT1-201ENST00000499732 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
NEAT1-201ENST00000499732 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 TUBB4BP68371 445 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 GRIN1Q05586 938 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 GABPAQ06546 454 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PKN1Q16512 942 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 SPECC1Q5M775 1068 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 CTCFLQ8NI51 663 aaPredicted RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 CTAGE1Q96RT6 745 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 KAT14Q9H8E8 782 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PCDHAC2Q9Y5I4 1007 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 BRD3Q15059 726 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PTPN21Q16825 1174 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PNMA8AQ86V59 439 aaPredicted RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 SHISA4Q96DD7 197 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 TAF1DQ9H5J8 278 aaPredicted RBP16.38■□□□□ 0.21
NEAT1-201ENST00000499732 CREBZFQ9NS37 354 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 KCNJ14Q9UNX9 436 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PCDHB6Q9Y5E3 794 aa16.38■□□□□ 0.21
NEAT1-201ENST00000499732 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 SYNRGQ9UMZ2 1314 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 TXLNAP40222 546 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 NFIAQ12857 509 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 TXLNBQ8N3L3 684 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
NEAT1-201ENST00000499732 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
NEAT1-201ENST00000499732 DHX58Q96C10 678 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 CCDC51Q96ER9 411 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 MED15Q96RN5 788 aa16.37■□□□□ 0.21
NEAT1-201ENST00000499732 DHX36Q9H2U1 1008 aaKnown RBP16.37■□□□□ 0.21
NEAT1-201ENST00000499732 SAMSN1Q9NSI8 373 aaKnown RBP16.37■□□□□ 0.21
NEAT1-201ENST00000499732 ITIH6Q6UXX5 1313 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 GREB1LQ9C091 1923 aaPredicted RBP16.36■□□□□ 0.21
NEAT1-201ENST00000499732 SASH3O75995 380 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 BMP15O95972 392 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 PBX1P40424 430 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
NEAT1-201ENST00000499732 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 APTXQ7Z2E3 356 aaKnown RBP16.36■□□□□ 0.21
NEAT1-201ENST00000499732 GPC2Q8N158 579 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 CEP112Q8N8E3 955 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 PARD6BQ9BYG5 372 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 TDRD3Q9H7E2 651 aaKnown RBP16.36■□□□□ 0.21
NEAT1-201ENST00000499732 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
NEAT1-201ENST00000499732 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
NEAT1-201ENST00000499732 ENTPD3O75355 529 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 XBP1P17861 261 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 FECHP22830 423 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 OAS2P29728 719 aaKnown RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 KIF5BP33176 963 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 NOVP48745 357 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 GPS2Q13227 327 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 SMC1AQ14683 1233 aaKnown RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 GRM4Q14833 912 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 SH3RF1Q7Z6J0 888 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 PPFIBP1Q86W92 1011 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 TMEM47Q9BQJ4 181 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 CSRNP2Q9H175 543 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 MRPL44Q9H9J2 332 aaKnown RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 hCG_1642624A0A1W2PR95 340 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 ZNF280AP59817 542 aaPredicted RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 NR5A1Q13285 461 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 CUL4BQ13620 913 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 CDKAL1Q5VV42 579 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 HNRNPLLQ8WVV9 542 aaKnown RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 ZBED3Q96IU2 234 aaPredicted RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 DESI2Q9BSY9 194 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 EHD4Q9H223 541 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
NEAT1-201ENST00000499732 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 ADGRG1Q9Y653 693 aa16.35■□□□□ 0.21
NEAT1-201ENST00000499732 KIF5CO60282 957 aa16.34■□□□□ 0.21
NEAT1-201ENST00000499732 KARSQ15046 597 aaKnown RBP16.34■□□□□ 0.21
NEAT1-201ENST00000499732 EAPPQ56P03 285 aaPredicted RBP16.34■□□□□ 0.21
NEAT1-201ENST00000499732 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
NEAT1-201ENST00000499732 RASGRP2Q7LDG7 609 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms