RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
HCN3-204ENST00000496230 E4F1Q66K89 784 aaPredicted RBP13.47□□□□□ -0.25
HCN3-204ENST00000496230 DLK2Q6UY11 383 aa13.47□□□□□ -0.25
HCN3-204ENST00000496230 OGFOD1Q8N543 542 aa13.47□□□□□ -0.25
HCN3-204ENST00000496230 C4orf32Q8N8J7 132 aa13.47□□□□□ -0.25
HCN3-204ENST00000496230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
HCN3-204ENST00000496230 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
HCN3-204ENST00000496230 CFBP00751 764 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 PDE4DQ08499 809 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
HCN3-204ENST00000496230 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 MLKLQ8NB16 471 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 TRIM47Q96LD4 638 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 SH2D3AQ9BRG2 576 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 DISC1Q9NRI5 854 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
HCN3-204ENST00000496230 FBXO28Q9NVF7 368 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
HCN3-204ENST00000496230 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 SOWAHDA6NJG2 315 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 SORBS3O60504 671 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 OR52Z1P0C646 297 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 RCAN1P53805 252 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.26
HCN3-204ENST00000496230 PRR16Q569H4 304 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 LRRN4CLQ8ND94 238 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.26
HCN3-204ENST00000496230 ARAP2Q8WZ64 1704 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 A0A1B0GUL6 1792 aa13.46□□□□□ -0.26
HCN3-204ENST00000496230 SBF2Q86WG5 1849 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 A0A1W2PRG0 241 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 PPP1R3GB7ZBB8 358 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 TPM3P06753 285 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 RBL2Q08999 1139 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 TOGARAM2Q6ZUX3 1019 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 BCAS3Q9H6U6 928 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 PI4KBQ9UBF8 816 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
HCN3-204ENST00000496230 RBAK-RBAKDNI3L0D1 243 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 CASP14P31944 242 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 GABPAQ06546 454 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 STK4Q13043 487 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 DLGAP5Q15398 846 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 KCNK18Q7Z418 384 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 ZNF579Q8NAF0 562 aaKnown RBP13.45□□□□□ -0.26
HCN3-204ENST00000496230 CCDC112Q8NEF3 446 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 SNX29Q8TEQ0 813 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 EPC1Q9H2F5 836 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 ASTN2O75129 1339 aaPredicted RBP13.45□□□□□ -0.26
HCN3-204ENST00000496230 TFRCP02786 760 aaKnown RBP13.45□□□□□ -0.26
HCN3-204ENST00000496230 SARSP49591 514 aaKnown RBP13.45□□□□□ -0.26
HCN3-204ENST00000496230 KLK7P49862 253 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 KANK3Q6NY19 840 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 NELFCDQ8IXH7 590 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
HCN3-204ENST00000496230 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
HCN3-204ENST00000496230 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
HCN3-204ENST00000496230 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
HCN3-204ENST00000496230 IKBKBO14920 756 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 CDC37Q16543 378 aaPredicted RBP13.44□□□□□ -0.26
HCN3-204ENST00000496230 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
HCN3-204ENST00000496230 IPO4Q8TEX9 1081 aaKnown RBP13.44□□□□□ -0.26
HCN3-204ENST00000496230 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
HCN3-204ENST00000496230 CNKSR1Q969H4 720 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 SPTLC3Q9NUV7 552 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 UBXN1Q04323 297 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 E2F4Q16254 413 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 STRIP1Q5VSL9 837 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
HCN3-204ENST00000496230 SFI1A8K8P3 1242 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 ABL1P00519 1130 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 KIAA1755Q5JYT7 1200 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 PPFIBP1Q86W92 1011 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 SMCHD1A6NHR9 2005 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 E9PMD0 336 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 URI1O94763 535 aaPredicted RBP13.43□□□□□ -0.26
HCN3-204ENST00000496230 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
HCN3-204ENST00000496230 ZNF76P36508 570 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 PAK1Q13153 545 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 ECM1Q16610 540 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 FAM83BQ5T0W9 1011 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 VSTM4Q8IW00 320 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
HCN3-204ENST00000496230 BAG1Q99933 345 aaPredicted RBP13.43□□□□□ -0.26
HCN3-204ENST00000496230 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms