RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 CCPG1Q9ULG6 757 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRK-214ENST00000495748 PCDHB15Q9Y5E8 787 aa9.11□□□□□ -0.95
PTPRK-214ENST00000495748 ICAM1P05362 532 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 TOP1P11387 765 aaKnown RBP9.1□□□□□ -0.95
PTPRK-214ENST00000495748 FOSL2P15408 326 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 CTDSPL2Q05D32 466 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 FSCN1Q16658 493 aaKnown RBP9.1□□□□□ -0.95
PTPRK-214ENST00000495748 MCMDC2Q4G0Z9 681 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 CCDC178Q5BJE1 867 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 NSMFQ6X4W1 530 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 KCTD1Q719H9 257 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 TLK2Q86UE8 772 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 TTC14Q96N46 770 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 RNF41Q9H4P4 317 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-214ENST00000495748 TCP11L1Q9NUJ3 509 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 PRR12Q9ULL5 1215 aa9.1□□□□□ -0.95
PTPRK-214ENST00000495748 ZNF536O15090 1300 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 ZMYM6O95789 1325 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 MYADML2A6NDP7 307 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 DYNC1LI2O43237 492 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 FGRP09769 529 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 ITGB8P26012 769 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 PDE1AP54750 535 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 RRP1P56182 461 aaKnown RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 CNTN2Q02246 1040 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 HDAC1Q13547 482 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 SYDE2Q5VT97 1194 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 BTNL9Q6UXG8 535 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 MFSD6Q6ZSS7 791 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 RPUSD2Q8IZ73 545 aaKnown RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 OTUD7AQ8TE49 926 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 MYLIPQ8WY64 445 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 FGD4Q96M96 766 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 KATNBL1Q9H079 304 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 CYP39A1Q9NYL5 469 aa9.09□□□□□ -0.95
PTPRK-214ENST00000495748 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
PTPRK-214ENST00000495748 RAD50Q92878 1312 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 MYO9BQ13459 2157 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 SUPT20HL2P0C7V6 817 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 DNAJB2P25686 324 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 NOVP48745 357 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 CPT1AP50416 773 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 EPHB4P54760 987 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 ITGA7Q13683 1181 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 RAB30Q15771 203 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 RRP12Q5JTH9 1297 aaKnown RBP9.08□□□□□ -0.96
PTPRK-214ENST00000495748 KIAA1211Q6ZU35 1233 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 FAM126BQ8IXS8 530 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 MORC4Q8TE76 937 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 TIFAQ96CG3 184 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-214ENST00000495748 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTPRK-214ENST00000495748 PPP1R12CQ9BZL4 782 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 MAF1Q9H063 256 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 RANBP17Q9H2T7 1088 aaKnown RBP9.08□□□□□ -0.96
PTPRK-214ENST00000495748 TTYH1Q9H313 450 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-214ENST00000495748 IL23AQ9NPF7 189 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 GPHNQ9NQX3 736 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-214ENST00000495748 IL17RBQ9NRM6 502 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 MSRAQ9UJ68 235 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 MCM3APO60318 1980 aa9.08□□□□□ -0.96
PTPRK-214ENST00000495748 SALL3Q9BXA9 1300 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 PTPDC1A2A3K4 754 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 HIP1O00291 1037 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 NKRFO15226 690 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTPRK-214ENST00000495748 ADCY6O43306 1168 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 NMT2O60551 498 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 KPNA6O60684 536 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 FGAP02671 866 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 FGBP02675 491 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 SMPD1P17405 629 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 BEX3Q00994 111 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 PDE4DQ08499 809 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 DUSP28Q4G0W2 176 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 MUM1L1Q5H9M0 696 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 TMEM240Q5SV17 173 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 AKNAD1Q5T1N1 836 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 GPATCH4Q5T3I0 446 aaKnown RBP9.07□□□□□ -0.96
PTPRK-214ENST00000495748 CXCL17Q6UXB2 119 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 RNF207Q6ZRF8 634 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 SLC43A3Q8NBI5 491 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 ESR2Q92731 530 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 TMEM47Q9BQJ4 181 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 HIPK3Q9H422 1215 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 RWDD1Q9H446 243 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-214ENST00000495748 ZNF576Q9H609 170 aa9.07□□□□□ -0.96
PTPRK-214ENST00000495748 LAMA2P24043 3122 aaKnown RBP9.07□□□□□ -0.96
PTPRK-214ENST00000495748 CCDC171Q6TFL3 1326 aa9.06□□□□□ -0.96
PTPRK-214ENST00000495748 WDR19Q8NEZ3 1342 aa9.06□□□□□ -0.96
PTPRK-214ENST00000495748 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-214ENST00000495748 CTAGE5O15320 804 aa9.06□□□□□ -0.96
PTPRK-214ENST00000495748 FOXP2O15409 715 aa9.06□□□□□ -0.96
PTPRK-214ENST00000495748 CD4P01730 458 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms