RNA–Protein interactions for RNA: ENST00000495517.5

RBM41-208, Transcript of RNA binding motif protein 41, human

TSL 2

Gene RBM41, Length 3,315 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM41-208	ENST00000495517	HIRA	P54198	1017 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	HAND2	P61296	217 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	KRT85	P78386	507 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	RASSF7	Q02833	373 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	MOGS	Q13724	837 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	RRP1B	Q14684	758 aa	Known RBP	7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	MB21D1	Q8N884	522 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	LINC00301	Q8NCQ3	95 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	FUCA2	Q9BTY2	467 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	CUEDC2	Q9H467	287 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	ORC3	Q9UBD5	711 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	HACL1	Q9UJ83	578 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	PASK	Q96RG2	1323 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	ATP2C1	P98194	919 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	PPIL2	Q13356	520 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	KRT40	Q6A162	431 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	KRT25	Q7Z3Z0	450 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	ZNF592	Q92610	1267 aa		7.91	□□□□□ -1.14
RBM41-208	ENST00000495517	GOLGA6L22	H0YM25	854 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	CUTA	O60888	179 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	CMA1	P23946	247 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	GNA11	P29992	359 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	KRT2	P35908	639 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	CDC37L1	Q7L3B6	337 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	KIAA0825	Q8IV33	1275 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	SHCBP1	Q8NEM2	672 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	C8orf76	Q96K31	380 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	TDRD3	Q9H7E2	651 aa	Known RBP	7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	PFAS	O15067	1338 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	USP17L5	A8MUK1	530 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	HOXC6	P09630	235 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	FXR2	P51116	673 aa	Known RBP eCLIP	7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	RESP18	Q5W5W9	173 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	B3GNT9	Q6UX72	402 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	DYNLL2	Q96FJ2	89 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	MXD3	Q9BW11	206 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	JMJD4	Q9H9V9	463 aa		7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	SRPRB	Q9Y5M8	271 aa	Known RBP	7.9	□□□□□ -1.14
RBM41-208	ENST00000495517	CYP2D7	A0A087X1C5	515 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	MINDY4B	A8MYZ0	360 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	SCP2	P22307	547 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	FGD1	P98174	961 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	PDIA5	Q14554	519 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	PLPP6	Q8IY26	295 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	RRP36	Q96EU6	259 aa	Known RBP	7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	CSRNP1	Q96S65	589 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	SENP7	Q9BQF6	1050 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	ALG1	Q9BT22	464 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	ZKSCAN5	Q9Y2L8	839 aa		7.9	□□□□□ -1.15
RBM41-208	ENST00000495517	JAK2	O60674	1132 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	PTPRE	P23469	700 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	NKX3-2	P78367	333 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	TSR1	Q2NL82	804 aa	Known RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	PHLDB3	Q6NSJ2	640 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	CHURC1	Q8WUH1	139 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	LEO1	Q8WVC0	666 aa	Predicted RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	CABP5	Q9NP86	173 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	TMEM63C	Q9P1W3	806 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	USP2	O75604	605 aa	Predicted RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	ICAM1	P05362	532 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	ZBTB48	P10074	688 aa	Predicted RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	EEF2	P13639	858 aa	Known RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	TOB1	P50616	345 aa	Predicted RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	LRSAM1	Q6UWE0	723 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	SH3RF1	Q7Z6J0	888 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	LDHD	Q86WU2	507 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	SPATA32	Q96LK8	384 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	MTMR9	Q96QG7	549 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	TAF1D	Q9H5J8	278 aa	Predicted RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	DDX19A	Q9NUU7	478 aa	Known RBP	7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	BCS1L	Q9Y276	419 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	PPME1	Q9Y570	386 aa		7.89	□□□□□ -1.15
RBM41-208	ENST00000495517	GPR37L1	O60883	481 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	PTPRA	P18433	802 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	ICA1	Q05084	483 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	RASA3	Q14644	834 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	CCSER1	Q9C0I3	900 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	SLC38A10	Q9HBR0	1119 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	BRMS1	Q9HCU9	246 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	PCDHA6	Q9UN73	950 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	PCDHA8	Q9Y5H6	950 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	RALGAPA2	Q2PPJ7	1873 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	ZNF536	O15090	1300 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	KLRF2	D3W0D1	207 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	EDIL3	O43854	480 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	RAD17	O75943	681 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	LONP1	P36776	959 aa	Known RBP	7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	SREBF1	P36956	1147 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	JAG1	P78504	1218 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	EVX2	Q03828	476 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	NBPF9	Q3BBW0	867 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	WWC2	Q6AWC2	1192 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	ABRA	Q8N0Z2	381 aa		7.88	□□□□□ -1.15
RBM41-208	ENST00000495517	NECAB1	Q8N987	351 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms