RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 PCDHA6Q9UN73 950 aa20.35■□□□□ 0.85
EXD3-212ENST00000491734 PCDHA8Q9Y5H6 950 aa20.35■□□□□ 0.85
EXD3-212ENST00000491734 POTEB2H3BUK9 544 aa20.35■□□□□ 0.85
EXD3-212ENST00000491734 LRRC47Q8N1G4 583 aaKnown RBP20.35■□□□□ 0.85
EXD3-212ENST00000491734 UPF1Q92900 1129 aaKnown RBP eCLIP20.35■□□□□ 0.85
EXD3-212ENST00000491734 PANX2Q96RD6 677 aa20.35■□□□□ 0.85
EXD3-212ENST00000491734 SPZ1Q9BXG8 430 aa20.35■□□□□ 0.85
EXD3-212ENST00000491734 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
EXD3-212ENST00000491734 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
EXD3-212ENST00000491734 TRAPPC10P48553 1259 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
EXD3-212ENST00000491734 AOC3Q16853 763 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 LONRF2Q1L5Z9 754 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 CT47A1Q5JQC4 288 aaPredicted RBP20.34■□□□□ 0.85
EXD3-212ENST00000491734 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 IGKV6D-41A0A0C4DH26 115 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 SHMT1P34896 483 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 GOLGA5Q8TBA6 731 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 NAA15Q9BXJ9 866 aaKnown RBP20.34■□□□□ 0.85
EXD3-212ENST00000491734 EPC1Q9H2F5 836 aa20.34■□□□□ 0.85
EXD3-212ENST00000491734 CWC15Q9P013 229 aaKnown RBP20.34■□□□□ 0.85
EXD3-212ENST00000491734 PSME4Q14997 1843 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 NR1I3Q14994 352 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 SRGAP1Q7Z6B7 1085 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 SUPT20HQ8NEM7 779 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 ZDHHC15Q96MV8 337 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 MRIQ9BWK5 157 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 ZCCHC17Q9NP64 241 aaKnown RBP20.33■□□□□ 0.85
EXD3-212ENST00000491734 RAB21Q9UL25 225 aa20.33■□□□□ 0.85
EXD3-212ENST00000491734 PLIN4Q96Q06 1357 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 CCDC175P0C221 793 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 PDHBP11177 359 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 MORC3Q14149 939 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 ZSCAN26Q16670 478 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 FAM177A1Q8N128 213 aaPredicted RBP20.32■□□□□ 0.84
EXD3-212ENST00000491734 TTLL6Q8N841 843 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 C4orf32Q8N8J7 132 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 CCDC148Q8NFR7 591 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 PIGSQ96S52 555 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 NFE2L3Q9Y4A8 694 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 KCNA3P22001 575 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 CASP1P29466 404 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
EXD3-212ENST00000491734 TCP10Q12799 353 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 DAGLBQ8NCG7 672 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 ADAM21Q9UKJ8 722 aa20.32■□□□□ 0.84
EXD3-212ENST00000491734 A0A1B0GTH6 734 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 CCDC194A0A1B0GVG4 234 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 C21orf2O43822 256 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 AFMP43652 599 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 NAPAP54920 295 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 INF2Q27J81 1249 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 CEP112Q8N8E3 955 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 MSANTD4Q8NCY6 345 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 RRP36Q96EU6 259 aaKnown RBP20.31■□□□□ 0.84
EXD3-212ENST00000491734 ERCC5P28715 1186 aaPredicted RBP20.31■□□□□ 0.84
EXD3-212ENST00000491734 FMR1Q06787 632 aaKnown RBP eCLIP20.31■□□□□ 0.84
EXD3-212ENST00000491734 CCDC34Q96HJ3 373 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 SWAP70Q9UH65 585 aa20.31■□□□□ 0.84
EXD3-212ENST00000491734 MYH8P13535 1937 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 FAM196BA6NMK8 535 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 ADKP55263 362 aaKnown RBP20.3■□□□□ 0.84
EXD3-212ENST00000491734 CHMP4BP1P59074 171 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 HDLBPQ00341 1268 aaKnown RBP20.3■□□□□ 0.84
EXD3-212ENST00000491734 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 SPATA20Q8TB22 786 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 CCDC12Q8WUD4 166 aaPredicted RBP20.3■□□□□ 0.84
EXD3-212ENST00000491734 PAGE5Q96GU1 130 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 GPCPD1Q9NPB8 672 aa20.3■□□□□ 0.84
EXD3-212ENST00000491734 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
EXD3-212ENST00000491734 HLA-DOAP06340 250 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 ZMYND12Q9H0C1 365 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 CDC23Q9UJX2 597 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 SMCO2A6NFE2 343 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 DDTLA6NHG4 134 aaPredicted RBP20.29■□□□□ 0.84
EXD3-212ENST00000491734 AKR1B15C9JRZ8 316 aaPredicted RBP20.29■□□□□ 0.84
EXD3-212ENST00000491734 DPEP1P16444 411 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 SHROOM1Q2M3G4 852 aaPredicted RBP20.29■□□□□ 0.84
EXD3-212ENST00000491734 BEND6Q5SZJ8 279 aaPredicted RBP20.29■□□□□ 0.84
EXD3-212ENST00000491734 GALNT17Q6IS24 598 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 SH3RF1Q7Z6J0 888 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 TMEM60Q9H2L4 133 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 MRPL44Q9H9J2 332 aaKnown RBP20.29■□□□□ 0.84
EXD3-212ENST00000491734 FAM198AQ9UFP1 575 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 ADGRG1Q9Y653 693 aa20.29■□□□□ 0.84
EXD3-212ENST00000491734 H3BQF6 201 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 TTLL1O95922 423 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 CDC25AP30304 524 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 HDXQ7Z353 690 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 STAMQ92783 540 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 ANKZF1Q9H8Y5 726 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
EXD3-212ENST00000491734 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
EXD3-212ENST00000491734 TUBBP07437 444 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 FECHP22830 423 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 SMARCA1P28370 1054 aa20.28■□□□□ 0.84
EXD3-212ENST00000491734 ATP2B2Q01814 1243 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms