RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 NT5C2P49902 561 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 CCDC144BQ3MJ40 725 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 DGKHQ86XP1 1220 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 TDHQ8IZJ6 230 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
RBM39-236ENST00000490484 PNMA1Q8ND90 353 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.46
RBM39-236ENST00000490484 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
RBM39-236ENST00000490484 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 KRT23Q9C075 422 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
RBM39-236ENST00000490484 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
RBM39-236ENST00000490484 DUSP11O75319 330 aaKnown RBP12.14□□□□□ -0.47
RBM39-236ENST00000490484 C6orf222P0C671 652 aaPredicted RBP12.14□□□□□ -0.47
RBM39-236ENST00000490484 CHMLP26374 656 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
RBM39-236ENST00000490484 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 GPATCH4Q5T3I0 446 aaKnown RBP12.14□□□□□ -0.47
RBM39-236ENST00000490484 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 EEPD1Q7L9B9 569 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 FBXO16Q8IX29 292 aaPredicted RBP12.14□□□□□ -0.47
RBM39-236ENST00000490484 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 KATNBL1Q9H079 304 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 CNNM2Q9H8M5 875 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
RBM39-236ENST00000490484 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
RBM39-236ENST00000490484 ASB14A6NK59 587 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 CALML3P27482 149 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 ACLYP53396 1101 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 PTH1RQ03431 593 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 BAATQ14032 418 aaPredicted RBP12.13□□□□□ -0.47
RBM39-236ENST00000490484 USH1GQ495M9 461 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
RBM39-236ENST00000490484 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 STARD7Q9NQZ5 370 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
RBM39-236ENST00000490484 WDR19Q8NEZ3 1342 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 PTGS1P23219 599 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 CST5P28325 142 aaPredicted RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 ALDH5A1P51649 535 aaPredicted RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 TLE2Q04725 743 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 KCNA10Q16322 511 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 ASPRV1Q53RT3 343 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 IFIT1BQ5T764 474 aaKnown RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 C1orf53Q5VUE5 145 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 SH3RF1Q7Z6J0 888 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 TLK2Q86UE8 772 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 KLHDC9Q8NEP7 349 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 CLEC4DQ8WXI8 215 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 ANKS1AQ92625 1134 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 TSEN34Q9BSV6 310 aaKnown RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
RBM39-236ENST00000490484 SPC25Q9HBM1 224 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
RBM39-236ENST00000490484 SGSM2O43147 1006 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 ASGR1P07306 291 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 CYP21A2P08686 494 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 CLTBP09497 229 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 PARP1P09874 1014 aaKnown RBP12.11□□□□□ -0.47
RBM39-236ENST00000490484 GJA9P57773 515 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 RPS6P62753 249 aaKnown RBP12.11□□□□□ -0.47
RBM39-236ENST00000490484 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 TRDNQ13061 729 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 CCSAPQ6IQ19 270 aaPredicted RBP12.11□□□□□ -0.47
RBM39-236ENST00000490484 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
RBM39-236ENST00000490484 GLT1D1Q96MS3 346 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 PDGFCQ9NRA1 345 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
RBM39-236ENST00000490484 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
RBM39-236ENST00000490484 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
RBM39-236ENST00000490484 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 SMPD1P17405 629 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 BEX3Q00994 111 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
RBM39-236ENST00000490484 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 ADGRF4Q8IZF3 695 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 BADQ92934 168 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
RBM39-236ENST00000490484 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
RBM39-236ENST00000490484 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
RBM39-236ENST00000490484 CTAGE5O15320 804 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 ITGB8P26012 769 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 SEC23AQ15436 765 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 FSCN1Q16658 493 aaKnown RBP12.09□□□□□ -0.47
RBM39-236ENST00000490484 QRICH1Q2TAL8 776 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 TMEM63BQ5T3F8 832 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 TAPT1Q6NXT6 567 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 ANKRD33Q7Z3H0 272 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms