RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
SSR1-209ENST00000488834 TRBV23OR9-2A0A075B6M9 112 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 LRRC10BA6NIK2 292 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 NRDCO43847 1150 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 SNRPB2P08579 225 aaKnown RBP6.12□□□□□ -1.43
SSR1-209ENST00000488834 PAMP19021 973 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 ARL4AP40617 200 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 ECI1P42126 302 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 IFRD2Q12894 506 aaPredicted RBP6.12□□□□□ -1.43
SSR1-209ENST00000488834 MTERF2Q49AM1 385 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 HSF5Q4G112 596 aaPredicted RBP6.12□□□□□ -1.43
SSR1-209ENST00000488834 ZNF513Q8N8E2 541 aaPredicted RBP6.12□□□□□ -1.43
SSR1-209ENST00000488834 NUP43Q8NFH3 380 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 ST13P5Q8NFI4 369 aaPredicted RBP6.12□□□□□ -1.43
SSR1-209ENST00000488834 LIN37Q96GY3 246 aaPredicted RBP6.12□□□□□ -1.43
SSR1-209ENST00000488834 MCMBPQ9BTE3 642 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 SLC6A17Q9H1V8 727 aa6.12□□□□□ -1.43
SSR1-209ENST00000488834 NPHP3-ACAD11A0A0J9YXS1 232 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 PDPK1O15530 556 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 PRKCAP17252 672 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 GALK1P51570 392 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 RBL2Q08999 1139 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 HSP90AA2PQ14568 343 aaPredicted RBP6.11□□□□□ -1.43
SSR1-209ENST00000488834 MLANAQ16655 118 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 LRRC47Q8N1G4 583 aaKnown RBP6.11□□□□□ -1.43
SSR1-209ENST00000488834 UBXN4Q92575 508 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 MRGPRX3Q96LB0 322 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 JMJD8Q96S16 334 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 SRPK1Q96SB4 655 aaKnown RBP6.11□□□□□ -1.43
SSR1-209ENST00000488834 DIRC2Q96SL1 478 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 NKX2-4Q9H2Z4 354 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 CYP26B1Q9NR63 512 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 CLEC1BQ9P126 229 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 IMPACTQ9P2X3 320 aa6.11□□□□□ -1.43
SSR1-209ENST00000488834 TBX1O43435 398 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 HOXC12P31275 282 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 L1CAMP32004 1257 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 PPP2R2AP63151 447 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 CYP4F8P98187 520 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 ADGRF1Q5T601 910 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 SLCO6A1Q86UG4 719 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 CCDC140Q96MF4 163 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 NSUN3Q9H649 340 aaKnown RBP6.1□□□□□ -1.43
SSR1-209ENST00000488834 GPRC5CQ9NQ84 441 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 PFDN2Q9UHV9 154 aa6.1□□□□□ -1.43
SSR1-209ENST00000488834 YBX2Q9Y2T7 364 aaKnown RBP6.1□□□□□ -1.43
SSR1-209ENST00000488834 ZNF503-AS2A6NEH8 195 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 CPP00450 1065 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 THBDP07204 575 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 PLS3P13797 630 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 SSRP1Q08945 709 aaKnown RBP6.09□□□□□ -1.43
SSR1-209ENST00000488834 RASGRF1Q13972 1273 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 NLRX1Q86UT6 975 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 CPNE8Q86YQ8 564 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 TMEM52Q8NDY8 209 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
SSR1-209ENST00000488834 IPO9Q96P70 1041 aaKnown RBP6.09□□□□□ -1.43
SSR1-209ENST00000488834 DEPDC7Q96QD5 511 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 PLCD4Q9BRC7 762 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 SP110Q9HB58 689 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 DCP1AQ9NPI6 582 aaPredicted RBP6.09□□□□□ -1.43
SSR1-209ENST00000488834 CRTAC1Q9NQ79 661 aa6.09□□□□□ -1.43
SSR1-209ENST00000488834 A0A1W2PQU0 124 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 PNLIPP16233 465 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 RBM10P98175 930 aaKnown RBP6.08□□□□□ -1.44
SSR1-209ENST00000488834 BICRALQ6AI39 1079 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 PRR23BQ6ZRT6 265 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 USP33Q8TEY7 942 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 COPS5Q92905 334 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 AARSD1Q9BTE6 412 aaKnown RBP6.08□□□□□ -1.44
SSR1-209ENST00000488834 OSBPL2Q9H1P3 480 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 EPB41L4BQ9H329 900 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 USP35Q9P2H5 1018 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
SSR1-209ENST00000488834 TRAV20A0A0B4J274 112 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 OR14I1A6ND48 311 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 MEFVO15553 781 aaPredicted RBP6.07□□□□□ -1.44
SSR1-209ENST00000488834 NPHS1O60500 1241 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 MPOP05164 745 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 SDHBP21912 280 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 TACR1P25103 407 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 SERINC3Q13530 473 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 KIR3DS1Q14943 382 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 IQCEQ6IPM2 695 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 OGFOD2Q6N063 350 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 SPATC1Q76KD6 591 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 CABP7Q86V35 215 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 IRF2BP1Q8IU81 584 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 KCTD13Q8WZ19 329 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 SLC38A3Q99624 504 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 CDC6Q99741 560 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 IER2Q9BTL4 223 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 SPATA9Q9BWV2 254 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 BTG4Q9NY30 223 aa6.07□□□□□ -1.44
SSR1-209ENST00000488834 SNTG2Q9NY99 539 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms