RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 YARSP54577 528 aaKnown RBP6.24□□□□□ -1.41
VPS13A-211ENST00000484581 BBS9Q3SYG4 887 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 GNPTABQ3T906 1256 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 THNSL2Q86YJ6 484 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 NIM1KQ8IY84 436 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 ACSF2Q96CM8 615 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-211ENST00000484581 PCDHB10Q9UN67 800 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 SMG5Q9UPR3 1016 aaKnown RBP6.24□□□□□ -1.41
VPS13A-211ENST00000484581 AGRPO00253 132 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 KCNQ2O43526 872 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 GLDCP23378 1020 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 STAT3P40763 770 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 BUD31P41223 144 aaPredicted RBP6.23□□□□□ -1.41
VPS13A-211ENST00000484581 GAB4Q2WGN9 574 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 HSP90AB2PQ58FF8 381 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
VPS13A-211ENST00000484581 AMIGO3Q86WK7 504 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 SLFN12Q8IYM2 578 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 LILRA2Q8N149 483 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 FAM13CQ8NE31 585 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 PDZD8Q8NEN9 1154 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 CYB5D2Q8WUJ1 264 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 CHAC2Q8WUX2 184 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 GPR62Q9BZJ7 368 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 RNF32Q9H0A6 362 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 C19orf44Q9H6X5 657 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 CD320Q9NPF0 282 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 CHPF2Q9P2E5 772 aa6.23□□□□□ -1.41
VPS13A-211ENST00000484581 FAM86C2PA6NEL3 165 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 CHURC1-FNTBB4DL54 471 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 NUAK1O60285 661 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 CNGA1P29973 690 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 PMS1P54277 932 aaKnown RBP6.22□□□□□ -1.41
VPS13A-211ENST00000484581 PABPC4Q13310 644 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS13A-211ENST00000484581 FERMT3Q86UX7 667 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 SPPL2CQ8IUH8 684 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 DTWD2Q8NBA8 298 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 PPP1R13LQ8WUF5 828 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 KISS1RQ969F8 398 aaPredicted RBP6.22□□□□□ -1.41
VPS13A-211ENST00000484581 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 KIF2CQ99661 725 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 SLC6A17Q9H1V8 727 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 NCOA5Q9HCD5 579 aaKnown RBP6.22□□□□□ -1.41
VPS13A-211ENST00000484581 HOMER2Q9NSB8 354 aa6.22□□□□□ -1.41
VPS13A-211ENST00000484581 FITM1A5D6W6 292 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 IRS4O14654 1257 aaPredicted RBP6.21□□□□□ -1.42
VPS13A-211ENST00000484581 PLD2O14939 933 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 SRFP11831 508 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 POLR2BP30876 1174 aaKnown RBP6.21□□□□□ -1.42
VPS13A-211ENST00000484581 SOX5P35711 763 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 FNDC3BQ53EP0 1204 aaKnown RBP6.21□□□□□ -1.42
VPS13A-211ENST00000484581 PRPF38AQ8NAV1 312 aaKnown RBP6.21□□□□□ -1.42
VPS13A-211ENST00000484581 SMARCC1Q92922 1105 aaPredicted RBP6.21□□□□□ -1.42
VPS13A-211ENST00000484581 EXOC2Q96KP1 924 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 CAAP1Q9H8G2 361 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 ATP8A1Q9Y2Q0 1164 aa6.21□□□□□ -1.42
VPS13A-211ENST00000484581 A0A087X0B3 334 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 TRAV20A0A0B4J274 112 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 ANKRD34BA5PLL1 514 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 RGS13O14921 159 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 LRRN2O75325 713 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 MYCLP1P12525 358 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 POU3F3P20264 500 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 CDKN1CP49918 316 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 C21orf62-AS1Q17RA5 79 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 CLEC16AQ2KHT3 1053 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 SV2CQ496J9 727 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 TMEM132EQ6IEE7 984 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 TTLL10Q6ZVT0 673 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 PPFIBP1Q86W92 1011 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 DHX37Q8IY37 1157 aaKnown RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 PHACTR4Q8IZ21 702 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 SLC6A18Q96N87 628 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 CEP89Q96ST8 783 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 AARSD1Q9BTE6 412 aaKnown RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 ARHGEF4Q9NR80 690 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 SUCOQ9UBS9 1254 aaKnown RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 MRPS23Q9Y3D9 190 aaKnown RBP6.2□□□□□ -1.42
VPS13A-211ENST00000484581 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
VPS13A-211ENST00000484581 A0A1W2PQU0 124 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 PDE8AO60658 829 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 PMLP29590 882 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 LINC00310P59036 64 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 EXOSC10Q01780 885 aaKnown RBP6.19□□□□□ -1.42
VPS13A-211ENST00000484581 HSP90AA2PQ14568 343 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-211ENST00000484581 ODR4Q5SWX8 454 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 ZNF605Q86T29 641 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 JAMLQ86YT9 394 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 IRF2BP1Q8IU81 584 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 JDP2Q8WYK2 163 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 IER2Q9BTL4 223 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 DHRS4Q9BTZ2 278 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 MRPL4Q9BYD3 311 aaKnown RBP6.19□□□□□ -1.42
VPS13A-211ENST00000484581 RAPGEFL1Q9UHV5 662 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 MCM8Q9UJA3 840 aa6.19□□□□□ -1.42
VPS13A-211ENST00000484581 G3BP2Q9UN86 482 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms