RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PDHBP11177 359 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 NT5C2P49902 561 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 IRX5P78411 483 aaPredicted RBP11.09□□□□□ -0.63
NUP50-215ENST00000484186 TNFAIP2Q03169 654 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 TOX2Q96NM4 488 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 DSCC1Q9BVC3 393 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 ELP1O95163 1332 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 NEDD4P46934 1319 aa11.09□□□□□ -0.63
NUP50-215ENST00000484186 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.08□□□□□ -0.64
NUP50-215ENST00000484186 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 KIAA0355O15063 1070 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 PQBP1O60828 265 aaKnown RBP11.08□□□□□ -0.64
NUP50-215ENST00000484186 ASGR1P07306 291 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 ITGB8P26012 769 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 NKX3-2P78367 333 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 SHHQ15465 462 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
NUP50-215ENST00000484186 Q7L0L9 218 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 ANKRD33Q7Z3H0 272 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 GLT1D1Q96MS3 346 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 ZKSCAN3Q9BRR0 538 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 PNMA2Q9UL42 364 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 ASTN1O14525 1302 aa11.08□□□□□ -0.64
NUP50-215ENST00000484186 CTAGE5O15320 804 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 KDM4AO75164 1064 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 RAG1P15918 1043 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 PDE4AP27815 886 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 CDK7P50613 346 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 IQSEC1Q6DN90 963 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 IQCA1Q86XH1 822 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 MORC4Q8TE76 937 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 ANKS1AQ92625 1134 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
NUP50-215ENST00000484186 MROH7Q68CQ1 1323 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 MCM3APO60318 1980 aa11.07□□□□□ -0.64
NUP50-215ENST00000484186 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 A0A0U1RQG5 324 aaPredicted RBP11.06□□□□□ -0.64
NUP50-215ENST00000484186 PTPDC1A2A3K4 754 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 B4E1Z4 1266 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 ARVCFO00192 962 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 NFIBO00712 420 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 DYNC1LI2O43237 492 aaPredicted RBP11.06□□□□□ -0.64
NUP50-215ENST00000484186 SMPD1P17405 629 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 BEX3Q00994 111 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
NUP50-215ENST00000484186 FAM109BQ6ICB4 259 aaPredicted RBP11.06□□□□□ -0.64
NUP50-215ENST00000484186 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 FBXO16Q8IX29 292 aaPredicted RBP11.06□□□□□ -0.64
NUP50-215ENST00000484186 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 CLEC4DQ8WXI8 215 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 ZSCAN10Q96SZ4 725 aaPredicted RBP11.06□□□□□ -0.64
NUP50-215ENST00000484186 AP5M1Q9H0R1 490 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 VTA1Q9NP79 307 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 PDGFCQ9NRA1 345 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 MTMR10Q9NXD2 777 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 Q9Y3F1 56 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 WDR19Q8NEZ3 1342 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 LAMA3Q16787 3333 aa11.06□□□□□ -0.64
NUP50-215ENST00000484186 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 ZEB2O60315 1214 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 CABYRO75952 493 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
NUP50-215ENST00000484186 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
NUP50-215ENST00000484186 FPGSQ05932 587 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 RNF207Q6ZRF8 634 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 TLK2Q86UE8 772 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 KRT23Q9C075 422 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 UBA5Q9GZZ9 404 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 IL25Q9H293 177 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 CNNM2Q9H8M5 875 aa11.05□□□□□ -0.64
NUP50-215ENST00000484186 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
NUP50-215ENST00000484186 TIMP1P01033 207 aa11.04□□□□□ -0.64
NUP50-215ENST00000484186 PTGS1P23219 599 aa11.04□□□□□ -0.64
NUP50-215ENST00000484186 CALML3P27482 149 aa11.04□□□□□ -0.64
NUP50-215ENST00000484186 EPHB4P54760 987 aa11.04□□□□□ -0.64
NUP50-215ENST00000484186 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms