RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 PALLDQ8WX93 1383 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 WDR46O15213 610 aaKnown RBP6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 RPL13P26373 211 aaKnown RBP6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 RGS22Q8NE09 1264 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 PIGBQ92521 554 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 SDCCAG3Q96C92 435 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 OSBPL5Q9H0X9 879 aaPredicted RBP6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 BLZF1Q9H2G9 400 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 MCM9Q9NXL9 1143 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 SLAIN2Q9P270 581 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 TNKSO95271 1327 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 MX2P20592 715 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 HMGB2P26583 209 aaKnown RBP6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 CCZ1BP86790 482 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 CCZ1P86791 482 aaPredicted RBP6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 PPARAQ07869 468 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 ARMCX5Q6P1M9 558 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 CTNND2Q9UQB3 1225 aa6.71□□□□□ -1.33
HNRNPU-208ENST00000475997 MON2Q7Z3U7 1717 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 TMEM232C9JQI7 657 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 MAN1A2O60476 641 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 COBLO75128 1261 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 SUN1O94901 812 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CALM1P0DP23 149 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CALM2P0DP24 149 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CALM3P0DP25 149 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 IFNAR1P17181 557 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 KRT15P19012 456 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 GYG1P46976 350 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 PPM1FP49593 454 aaPredicted RBP6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 LMNB2Q03252 620 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 DEUP1Q05D60 604 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 TTC38Q5R3I4 469 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 MMS22LQ6ZRQ5 1243 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 SLF2Q8IX21 1173 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 ISCA1Q9BUE6 129 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CARD10Q9BWT7 1032 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 PPANQ9NQ55 473 aaKnown RBP6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 SAMSN1Q9NSI8 373 aaKnown RBP6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CTTNBP2NLQ9P2B4 639 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 DENND2AQ9ULE3 1009 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 PCDHB6Q9Y5E3 794 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 SYNRGQ9UMZ2 1314 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 ARHGAP42A6NI28 874 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 USP17L12C9JPN9 530 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 USP17L21D6R901 530 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 APOEP02649 317 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CALML3P27482 149 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 UAP1Q16222 522 aaPredicted RBP6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 ANKRD20A4Q4UJ75 823 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 ANKRD20A8PQ5CZ79 823 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 ANKRD20A2Q5SQ80 823 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 ANKRD20A1Q5TYW2 823 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 SHC4Q6S5L8 630 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 HEATR3Q7Z4Q2 680 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 SYCE1Q8N0S2 351 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 CENPKQ9BS16 269 aa6.71□□□□□ -1.34
HNRNPU-208ENST00000475997 FOXN1O15353 648 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SPOPO43791 374 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 KRT9P35527 623 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 ANTXR2P58335 489 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 DDB1Q16531 1140 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 KMT5BQ4FZB7 885 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 N4BP2L2Q92802 583 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC51Q96ER9 411 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 NRBF2Q96F24 287 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 RILPQ96NA2 401 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 GOLGA8QA0A0J9YX86 632 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 GOLGA8OA6NCC3 632 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 GOLGA8NF8WBI6 632 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 ZPR1O75312 459 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 LIFRP42702 1097 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 PSMD7P51665 324 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 POLE2P56282 527 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 TMED1Q13445 227 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 RASGRF1Q13972 1273 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 FAM47AQ5JRC9 791 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 E4F1Q66K89 784 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 VSTM4Q8IW00 320 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 LCORLQ8N3X6 602 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 DPF2Q92785 391 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 EXOC4Q96A65 974 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 TAB2Q9NYJ8 693 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 DDX41Q9UJV9 622 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 MAN1B1Q9UKM7 699 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 PEAK1Q9H792 1746 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 PALM3A6NDB9 673 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CHUKO15111 745 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 STX10O60499 249 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 FMNL1O95466 1100 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 BAG2O95816 211 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SYF2O95926 243 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 MMP1P03956 469 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 ARID5AQ03989 594 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 RSPH3Q86UC2 560 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC24Q8N4L8 307 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms