RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TRAPPC11Q7Z392 1133 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 TATDN2Q93075 761 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 TARSL2A2RTX5 802 aaKnown RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 LONRF3Q496Y0 759 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 CCNI2Q6ZMN8 369 aaPredicted RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 NSMCE1Q8WV22 266 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MAN1A1P33908 653 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 SKOR1P84550 965 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 ENC1O14682 589 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MX2P20592 715 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 CYP7A1P22680 504 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 PAK2Q13177 524 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MFAP3LO75121 409 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 TTMPQ5BVD1 217 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 NAA35Q5VZE5 725 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 APTXQ7Z2E3 356 aaKnown RBP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MORC4Q8TE76 937 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MYO1AQ9UBC5 1043 aa12.62□□□□□ -0.39
U2AF1-209ENST00000475639 NOC2LQ9Y3T9 749 aaKnown RBP12.62□□□□□ -0.39
U2AF1-209ENST00000475639 MYH8P13535 1937 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 SRGAP2O75044 1071 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 TRIM14Q14142 442 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ZKSCAN8Q15776 578 aaPredicted RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 PDCD2Q16342 344 aaPredicted RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 PSPC1Q8WXF1 523 aaKnown RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ARL8AQ96BM9 186 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 MYO5BQ9ULV0 1848 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 GOLGA8KD6RF30 607 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 MUM1Q2TAK8 710 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 KRT71Q3SY84 523 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 POLD4Q9HCU8 107 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 LARSQ9P2J5 1176 aaKnown RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 CASP14P31944 242 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ERVK-24P63145 666 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 PLCB4Q15147 1175 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ZNF827Q17R98 1081 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 CHST3Q7LGC8 479 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ENOX1Q8TC92 643 aaKnown RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 AENQ8WTP8 325 aaKnown RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 TRIM10Q9UDY6 481 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ZNF609O15014 1411 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 EPB41P11171 864 aaKnown RBP12.61□□□□□ -0.39
U2AF1-209ENST00000475639 SNCBQ16143 134 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ANKLE2Q86XL3 938 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 SDCCAG3Q96C92 435 aa12.61□□□□□ -0.39
U2AF1-209ENST00000475639 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
U2AF1-209ENST00000475639 KRT5P13647 590 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 FXR1P51114 621 aaKnown RBP eCLIP12.6□□□□□ -0.39
U2AF1-209ENST00000475639 PHEXP78562 749 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 MTMR3Q13615 1198 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 PALM3A6NDB9 673 aaPredicted RBP12.6□□□□□ -0.39
U2AF1-209ENST00000475639 ADCY2Q08462 1091 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 E2F5Q15329 346 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 CASC4Q6P4E1 433 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 NAP1L4Q99733 375 aaKnown RBP12.6□□□□□ -0.39
U2AF1-209ENST00000475639 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 MAN1B1Q9UKM7 699 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 OPHN1O60890 802 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 PBX1P40424 430 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 GABPAQ06546 454 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 CYB5D1Q6P9G0 228 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 ARMC2Q8NEN0 867 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 NDUFB9Q9Y6M9 179 aa12.6□□□□□ -0.39
U2AF1-209ENST00000475639 ARHGAP42A6NI28 874 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 GYPCP04921 128 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 KRT3P12035 628 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 LRRC43Q8N309 656 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 P3H4Q92791 437 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms