RNA–Protein interactions for RNA: ENST00000472255.1

TUBBP11-201, Transcript of tubulin beta class I pseudogene 11, humanhuman

BASIC

Gene TUBBP11, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP11-201ENST00000472255 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 MYL3P08590 195 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 MX1P20591 662 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 IGFBP4P22692 258 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 CALML3P27482 149 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 SMAD3P84022 425 aaKnown RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 TAPT1Q6NXT6 567 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 GIMAP6Q6P9H5 292 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 MAMDC4Q6UXC1 1216 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 SLC30A10Q6XR72 485 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 KIAA1211Q6ZU35 1233 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 ANKRD33Q7Z3H0 272 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 TMCO2Q7Z6W1 182 aaPredicted RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 FAM126BQ8IXS8 530 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 GMCL1P1Q8NEA9 526 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 TBC1D5Q92609 795 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 TIFAQ96CG3 184 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 ZFP91Q96JP5 570 aaPredicted RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 GLT1D1Q96MS3 346 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 PBX4Q9BYU1 374 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 LNPKQ9C0E8 428 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 ZNF576Q9H609 170 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 ACAD9Q9H845 621 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 TRMT13Q9NUP7 481 aaKnown RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 CCPG1Q9ULG6 757 aa8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 YBX2Q9Y2T7 364 aaKnown RBP8.62□□□□□ -1.03
TUBBP11-201ENST00000472255 PTPDC1A2A3K4 754 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 B4GALT4O60513 344 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 ZFYP08048 801 aaPredicted RBP8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 GNAT2P19087 354 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 STAT2P52630 851 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 GJA9P57773 515 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 PDE4BQ07343 736 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 ADGRE1Q14246 886 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 FSCN1Q16658 493 aaKnown RBP8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 C1orf53Q5VUE5 145 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 KRT40Q6A162 431 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 RCSD1Q6JBY9 416 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 SPRED2Q7Z698 418 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 TLK2Q86UE8 772 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 TBC1D10CQ8IV04 446 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 CHST13Q8NET6 341 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 NUP133Q8WUM0 1156 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 RILPL2Q969X0 211 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 VWCEQ96DN2 955 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 NECAB3Q96P71 396 aaPredicted RBP8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 UBA5Q9GZZ9 404 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 UPF3AQ9H1J1 476 aaKnown RBP8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 ABHD16BQ9H3Z7 469 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 CYP39A1Q9NYL5 469 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 PLXNA1Q9UIW2 1896 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 MCM3APO60318 1980 aa8.61□□□□□ -1.03
TUBBP11-201ENST00000472255 A0A0U1RQG5 324 aaPredicted RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 TRIM6-TRIM34B2RNG4 842 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 ATP2A1O14983 1001 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 ARHGEF15O94989 841 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 FGAP02671 866 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 SLC3A2P08195 630 aaKnown RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 COPB2P35606 906 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 ITGA7Q13683 1181 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 TTLL4Q14679 1199 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 USH1GQ495M9 461 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 FAM47CQ5HY64 1035 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 SYDE2Q5VT97 1194 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 MFSD5Q6N075 450 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 CHURC1Q8WUH1 139 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 AP5M1Q9H0R1 490 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 WNT8AQ9H1J5 351 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 HIPK3Q9H422 1215 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 CHMP4BQ9H444 224 aaKnown RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 VAT1LQ9HCJ6 419 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 NRBP1Q9UHY1 535 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 GNEQ9Y223 722 aaKnown RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 MYH7P12883 1935 aa8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 GREB1LQ9C091 1923 aaPredicted RBP8.6□□□□□ -1.03
TUBBP11-201ENST00000472255 SALL3Q9BXA9 1300 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 ERC2O15083 957 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 CD4P01730 458 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 IGHDP01880 384 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 PDE1AP54750 535 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 CHST3Q7LGC8 479 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 FAM160B2Q86V87 743 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 PCSK9Q8NBP7 692 aaKnown RBP8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 CLEC4DQ8WXI8 215 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 GMCL1Q96IK5 515 aa8.59□□□□□ -1.03
TUBBP11-201ENST00000472255 FBXO40Q9UH90 709 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms