RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 MORN1Q5T089 497 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 NBPF11Q86T75 865 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 PIGSQ96S52 555 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 MMP19Q99542 508 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 LLPHQ9BRT6 129 aaKnown RBP14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 RNF146Q9NTX7 359 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 GJD2Q9UKL4 321 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 RIPK3Q9Y572 518 aa14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 V9GY48 417 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1-204ENST00000469778 GHRHRQ02643 423 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 MAP2K5Q13163 448 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 ME3Q16798 604 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 SLC35G1Q2M3R5 365 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 WDR78Q5VTH9 848 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 PPP1R18Q6NYC8 613 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 OTOP1Q7RTM1 612 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 ANKRD35Q8N283 1001 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 MSL3Q8N5Y2 521 aaKnown RBP14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 PXYLP1Q8TE99 480 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 CCDC12Q8WUD4 166 aaPredicted RBP14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 WASF1Q92558 559 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 USP6NLQ92738 828 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 DDX11Q96FC9 970 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 CPVLQ9H3G5 476 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
SPTLC1-204ENST00000469778 B4DLN1 442 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 DEXIO95424 95 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 FLT3LGP49771 235 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 MRPL12P52815 198 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 CCT2P78371 535 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 SSRP1Q08945 709 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 SCRN1Q12765 414 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 ZNF467Q7Z7K2 595 aaPredicted RBP14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 DPP9Q86TI2 863 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 HOMER1Q86YM7 354 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 MPHOSPH6Q99547 160 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 SH3GLB2Q9NR46 395 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 PTPN22Q9Y2R2 807 aa14.58□□□□□ -0.08
SPTLC1-204ENST00000469778 DNAJC25-GNG10A0A024R161 153 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 SCG2P13521 617 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 CTGFP29279 349 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 SNAP25P60880 206 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 PFKFB3Q16875 520 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 RAB11FIP4Q86YS3 637 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 CCDC82Q8N4S0 544 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 RAET1EQ8TD07 263 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 SNX21Q969T3 373 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 ADD3Q9UEY8 706 aaKnown RBP14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 CNTNAP5Q8WYK1 1306 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 STK36Q9NRP7 1315 aa14.57□□□□□ -0.08
SPTLC1-204ENST00000469778 PIK3CDO00329 1044 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 PEX10O60683 326 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 XBP1P17861 261 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 ADORA2AP29274 412 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 STK3Q13188 491 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 USH1GQ495M9 461 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 RNF207Q6ZRF8 634 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 CMTR1Q8N1G2 835 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 SLAIN1Q8ND83 568 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 APBA2Q99767 749 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 LARP6Q9BRS8 491 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 SLC26A6Q9BXS9 759 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 NCOA5Q9HCD5 579 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 A1CFQ9NQ94 594 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 BARHL2Q9NY43 387 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 CYP39A1Q9NYL5 469 aa14.56□□□□□ -0.08
SPTLC1-204ENST00000469778 POTEB2H3BUK9 544 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 PPP1R11O60927 126 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 GNA11P29992 359 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 PRKCZQ05513 592 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 GALNT17Q6IS24 598 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 CCDC148Q8NFR7 591 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 CUL5Q93034 780 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 PSTPIP2Q9H939 334 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 NRBP1Q9UHY1 535 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 KIF3AQ9Y496 699 aa14.55□□□□□ -0.08
SPTLC1-204ENST00000469778 ESYT2A0FGR8 921 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 GCOM1H8Y6P7 765 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 POLR2MP0CAP2 368 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 CAPN2P17655 700 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 HSD17B4P51659 736 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 RPS6P62753 249 aaKnown RBP14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 ZNF792Q3KQV3 632 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 NSMFQ6X4W1 530 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 HEATR3Q7Z4Q2 680 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 FAM133AQ8N9E0 248 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 BICD2Q8TD16 824 aa14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1-204ENST00000469778 COL11A1P12107 1806 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms