RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 USP38Q8NB14 1042 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 ATG4CQ96DT6 458 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 ZSWIM6Q9HCJ5 1215 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 TRIM43BA6NCK2 446 aa22.31■■□□□ 1.16
USP11-205ENST00000467378 HOXC6P09630 235 aa22.31■■□□□ 1.16
USP11-205ENST00000467378 CASTP20810 708 aaKnown RBP22.31■■□□□ 1.16
USP11-205ENST00000467378 RPS6KB1P23443 525 aa22.31■■□□□ 1.16
USP11-205ENST00000467378 ZNF543Q08ER8 600 aa22.31■■□□□ 1.16
USP11-205ENST00000467378 PRPF38AQ8NAV1 312 aaKnown RBP22.31■■□□□ 1.16
USP11-205ENST00000467378 TRIM43Q96BQ3 446 aaPredicted RBP22.31■■□□□ 1.16
USP11-205ENST00000467378 SLF1Q9BQI6 1058 aa22.31■■□□□ 1.16
USP11-205ENST00000467378 BTBD7Q9P203 1132 aa22.31■■□□□ 1.16
USP11-205ENST00000467378 CDH23Q9H251 3354 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 CYBAP13498 195 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 STAT2P52630 851 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 TROAPQ12815 778 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 GRB14Q14449 540 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 GRIN2CQ14957 1233 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 CCDC96Q2M329 555 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 TTBK2Q6IQ55 1244 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 BTNL9Q6UXG8 535 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 RUFY3Q7L099 469 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 FAM160B2Q86V87 743 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 CHURC1Q8WUH1 139 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 FERMT2Q96AC1 680 aa22.3■■□□□ 1.16
USP11-205ENST00000467378 FRMPD2Q68DX3 1309 aaPredicted RBP22.3■■□□□ 1.16
USP11-205ENST00000467378 ADCYAP1R1P41586 468 aa22.29■■□□□ 1.16
USP11-205ENST00000467378 SNX17Q15036 470 aa22.29■■□□□ 1.16
USP11-205ENST00000467378 SAMD1Q6SPF0 538 aaPredicted RBP22.29■■□□□ 1.16
USP11-205ENST00000467378 DPP9Q86TI2 863 aa22.29■■□□□ 1.16
USP11-205ENST00000467378 SGMS1Q86VZ5 419 aa22.29■■□□□ 1.16
USP11-205ENST00000467378 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
USP11-205ENST00000467378 MYO9BQ13459 2157 aa22.29■■□□□ 1.16
USP11-205ENST00000467378 SMCHD1A6NHR9 2005 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 VWA5AO00534 786 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 GOLGA8HP0CJ92 632 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 GPATCH4Q5T3I0 446 aaKnown RBP22.28■■□□□ 1.16
USP11-205ENST00000467378 Q6ZUG5 572 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 ZNF654Q8IZM8 581 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 FBXL16Q8N461 479 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 MB21D1Q8N884 522 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 REPS2Q8NFH8 660 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 KIFC2Q96AC6 838 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 AGXT2Q9BYV1 514 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 BACH2Q9BYV9 841 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 ISY1Q9ULR0 285 aaKnown RBP22.28■■□□□ 1.16
USP11-205ENST00000467378 CYP46A1Q9Y6A2 500 aa22.28■■□□□ 1.16
USP11-205ENST00000467378 ZNFX1Q9P2E3 1918 aaKnown RBP22.27■■□□□ 1.16
USP11-205ENST00000467378 ZNF236Q9UL36 1845 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 CCDC69A6NI79 296 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 TLE2Q04725 743 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 ASPRV1Q53RT3 343 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 NFXL1Q6ZNB6 911 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 CATIPQ7Z7H3 387 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 PPM1EQ8WY54 764 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 FAM122AQ96E09 287 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 PRR12Q9ULL5 1215 aa22.27■■□□□ 1.16
USP11-205ENST00000467378 PLXNA1Q9UIW2 1896 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 MYH6P13533 1939 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 PALM3A6NDB9 673 aaPredicted RBP22.26■■□□□ 1.15
USP11-205ENST00000467378 PARP1P09874 1014 aaKnown RBP22.26■■□□□ 1.15
USP11-205ENST00000467378 DNAJB2P25686 324 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 SLC16A2P36021 539 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 PLA2G5P39877 138 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 IKQ13123 557 aaPredicted RBP22.26■■□□□ 1.15
USP11-205ENST00000467378 GRM4Q14833 912 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 TMEM132BQ14DG7 1078 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 STAG2Q8N3U4 1231 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 MAP3K14Q99558 947 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 C22orf23Q9BZE7 217 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 UPF3BQ9BZI7 483 aaKnown RBP22.26■■□□□ 1.15
USP11-205ENST00000467378 SLC38A10Q9HBR0 1119 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 MAD2L2Q9UI95 211 aa22.26■■□□□ 1.15
USP11-205ENST00000467378 SEPT4O43236 478 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 ZBED4O75132 1171 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 DDAH1O94760 285 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 FDX1P10109 184 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 RBM25P49756 843 aaKnown RBP22.25■■□□□ 1.15
USP11-205ENST00000467378 EPHB4P54760 987 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 MYL10Q9BUA6 226 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 UBA5Q9GZZ9 404 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 BRPF3Q9ULD4 1205 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 SLC12A7Q9Y666 1083 aa22.25■■□□□ 1.15
USP11-205ENST00000467378 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.24■■□□□ 1.15
USP11-205ENST00000467378 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.24■■□□□ 1.15
USP11-205ENST00000467378 RAG1P15918 1043 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 ITGB8P26012 769 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 LRRC41Q15345 812 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 SYDE2Q5VT97 1194 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 OLFML2BQ68BL8 750 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 NUP133Q8WUM0 1156 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 SPATC1LQ9H0A9 340 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 CPVLQ9H3G5 476 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 ZNF576Q9H609 170 aa22.24■■□□□ 1.15
USP11-205ENST00000467378 ZNF214Q9UL59 606 aaPredicted RBP22.24■■□□□ 1.15
USP11-205ENST00000467378 ATP2A1O14983 1001 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 IGHA2P01877 340 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 CLTBP09497 229 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 CALM1P0DP23 149 aa22.23■■□□□ 1.15
USP11-205ENST00000467378 CALM2P0DP24 149 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms