RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 ARID5BQ14865 1188 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 RAB3GAP1Q15042 981 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 C20orf194Q5TEA3 1177 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 LCORLQ8N3X6 602 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 ACER1Q8TDN7 264 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 SDR42E1Q8WUS8 393 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 SOCS4Q8WXH5 440 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 TRIB2Q92519 343 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 DPF3Q92784 378 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 PAGR1Q9BTK6 254 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 KIAA1683Q9H0B3 1180 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 PORCNQ9H237 461 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 BOLA2Q9H3K6 86 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 CABP5Q9NP86 173 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 DCP1AQ9NPI6 582 aaPredicted RBP8.51□□□□□ -1.05
SND1-205ENST00000467238 POLR3EQ9NVU0 708 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 PAG1Q9NWQ8 432 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 MCM9Q9NXL9 1143 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 RPTORQ8N122 1335 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 USP17L15C9J2P7 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L13C9JLJ4 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L11C9JVI0 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L18D6R9N7 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L22D6RA61 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L17D6RBQ6 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L19D6RCP7 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L20D6RJB6 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 CNMDO75829 334 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 TFRCP02786 760 aaKnown RBP8.5□□□□□ -1.05
SND1-205ENST00000467238 XRCC5P13010 732 aaKnown RBP8.5□□□□□ -1.05
SND1-205ENST00000467238 ATP5JP18859 108 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 CYP2B6P20813 491 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 MAPK4P31152 587 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP17L24Q0WX57 530 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 NR5A1Q13285 461 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 SEPT2Q15019 361 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 ZYXQ15942 572 aaKnown RBP8.5□□□□□ -1.05
SND1-205ENST00000467238 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 MAP3K21Q5TCX8 1036 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 LBX2Q6XYB7 198 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 CATSPERGQ6ZRH7 1159 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 GPR142Q7Z601 462 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 USP6NLQ92738 828 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 HAUS7Q99871 368 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 SPOCK3Q9BQ16 436 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 ARMT1Q9H993 441 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 RABGAP1Q9Y3P9 1069 aa8.5□□□□□ -1.05
SND1-205ENST00000467238 MSTNO14793 375 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 UPP2O95045 317 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 MBD4O95243 580 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 CHGBP05060 677 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 CYP2D6P10635 497 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 UBE3CQ15386 1083 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
SND1-205ENST00000467238 PLEKHH3Q7Z736 793 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 CCAR1Q8IX12 1150 aaKnown RBP8.49□□□□□ -1.05
SND1-205ENST00000467238 CCDC155Q8N6L0 562 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 SLC44A5Q8NCS7 719 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 DIS3LQ8TF46 1054 aaKnown RBP8.49□□□□□ -1.05
SND1-205ENST00000467238 SCARF2Q96GP6 870 aaPredicted RBP8.49□□□□□ -1.05
SND1-205ENST00000467238 PAWRQ96IZ0 340 aaKnown RBP8.49□□□□□ -1.05
SND1-205ENST00000467238 LRRCC1Q9C099 1032 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 PRO3102Q9H379 93 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
SND1-205ENST00000467238 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 NR2E3Q9Y5X4 410 aa8.49□□□□□ -1.05
SND1-205ENST00000467238 A0A1W2PRG0 241 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 MPHOSPH10O00566 681 aaKnown RBP8.48□□□□□ -1.05
SND1-205ENST00000467238 PRKAB2O43741 272 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 SMARCA5O60264 1052 aaPredicted RBP8.48□□□□□ -1.05
SND1-205ENST00000467238 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
SND1-205ENST00000467238 ZKSCAN1P17029 563 aaPredicted RBP8.48□□□□□ -1.05
SND1-205ENST00000467238 RGS2P41220 211 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 CCNA1P78396 465 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 CCL14Q16627 93 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 LYPD4Q6UWN0 246 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 NECAB2Q7Z6G3 386 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 TRMT44Q8IYL2 757 aaKnown RBP8.48□□□□□ -1.05
SND1-205ENST00000467238 DYNLL2Q96FJ2 89 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 APBA2Q99767 749 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.48□□□□□ -1.053e-17■■■□□ 14.7
SND1-205ENST00000467238 RPAP3Q9H6T3 665 aaPredicted RBP8.48□□□□□ -1.05
SND1-205ENST00000467238 ATP8A2Q9NTI2 1148 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 BTBD7Q9P203 1132 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 OGDHLQ9ULD0 1010 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 TTC28Q96AY4 2481 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 UNC80Q8N2C7 3258 aa8.48□□□□□ -1.05
SND1-205ENST00000467238 PRUNE2Q8WUY3 3088 aa8.47□□□□□ -1.05
SND1-205ENST00000467238 SMIM22K7EJ46 135 aa8.47□□□□□ -1.05
SND1-205ENST00000467238 PROCP04070 461 aa8.47□□□□□ -1.05
SND1-205ENST00000467238 AKR1B1P15121 316 aa8.47□□□□□ -1.05
SND1-205ENST00000467238 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms