RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
GTF3A-205ENST00000466776 PNMA2Q9UL42 364 aa14.13□□□□□ -0.15
GTF3A-205ENST00000466776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
GTF3A-205ENST00000466776 ZNF536O15090 1300 aa14.13□□□□□ -0.15
GTF3A-205ENST00000466776 CDK7P50613 346 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 EPHB4P54760 987 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 NKX3-2P78367 333 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 FAM126BQ8IXS8 530 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 COL25A1Q9BXS0 654 aaPredicted RBP14.12□□□□□ -0.15
GTF3A-205ENST00000466776 HELLSQ9NRZ9 838 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 ADD3Q9UEY8 706 aaKnown RBP14.12□□□□□ -0.15
GTF3A-205ENST00000466776 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 CCPG1Q9ULG6 757 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 PRR12Q9ULL5 1215 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 MTMR7Q9Y216 660 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 PCDHB15Q9Y5E8 787 aa14.12□□□□□ -0.15
GTF3A-205ENST00000466776 ADCY6O43306 1168 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 ORC4O43929 436 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 FSCN1Q16658 493 aaKnown RBP14.11□□□□□ -0.15
GTF3A-205ENST00000466776 ANKRD45Q5TZF3 282 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 IQSEC1Q6DN90 963 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 NSMFQ6X4W1 530 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 TICAM2Q86XR7 235 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 OTUD7AQ8TE49 926 aaPredicted RBP14.11□□□□□ -0.15
GTF3A-205ENST00000466776 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 MPHOSPH6Q99547 160 aaKnown RBP14.11□□□□□ -0.15
GTF3A-205ENST00000466776 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.15
GTF3A-205ENST00000466776 PPP1R12CQ9BZL4 782 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 KATNBL1Q9H079 304 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 VTA1Q9NP79 307 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 Q9Y3F1 56 aa14.11□□□□□ -0.15
GTF3A-205ENST00000466776 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 SOWAHBA6NEL2 793 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 ICAM1P05362 532 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 BEX3Q00994 111 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
GTF3A-205ENST00000466776 ALX1Q15699 326 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 TIFAQ96CG3 184 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 IL17RBQ9NRM6 502 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 CYP39A1Q9NYL5 469 aa14.1□□□□□ -0.15
GTF3A-205ENST00000466776 GNEQ9Y223 722 aaKnown RBP14.1□□□□□ -0.15
GTF3A-205ENST00000466776 LAMA4Q16363 1823 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 DYNC1LI2O43237 492 aaPredicted RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 NMT2O60551 498 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 CSF2RAP15509 400 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 ITGA7Q13683 1181 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 CXCL17Q6UXB2 119 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 PIP4P2Q8N4L2 257 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 SYMPKQ92797 1274 aaKnown RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 GAS2L1Q99501 681 aaPredicted RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 RANBP17Q9H2T7 1088 aaKnown RBP14.09□□□□□ -0.15
GTF3A-205ENST00000466776 HIPK3Q9H422 1215 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 ZNF576Q9H609 170 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 SALL3Q9BXA9 1300 aa14.09□□□□□ -0.15
GTF3A-205ENST00000466776 B4DLN1 442 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 CTAGE5O15320 804 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 CD4P01730 458 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 SMPD1P17405 629 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 MRPL12P52815 198 aaKnown RBP14.08□□□□□ -0.16
GTF3A-205ENST00000466776 MFAP1P55081 439 aaKnown RBP14.08□□□□□ -0.16
GTF3A-205ENST00000466776 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.16
GTF3A-205ENST00000466776 RAB30Q15771 203 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 MCMDC2Q4G0Z9 681 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 BRDTQ58F21 947 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-205ENST00000466776 MUM1L1Q5H9M0 696 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 TMEM240Q5SV17 173 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 EEPD1Q7L9B9 569 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 FBXO16Q8IX29 292 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-205ENST00000466776 IL23AQ9NPF7 189 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 MSRAQ9UJ68 235 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 ASTN1O14525 1302 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 ZMYM6O95789 1325 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 RAD50Q92878 1312 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
GTF3A-205ENST00000466776 PTPDC1A2A3K4 754 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 FOXP2O15409 715 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 FGRP09769 529 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 NOVP48745 357 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 CPT1AP50416 773 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 PDE1AP54750 535 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 SNAP25P60880 206 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 VPS53Q5VIR6 699 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 BTNL9Q6UXG8 535 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 ZNF365Q70YC5 407 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 RPUSD2Q8IZ73 545 aaKnown RBP14.07□□□□□ -0.16
GTF3A-205ENST00000466776 SLC43A3Q8NBI5 491 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
GTF3A-205ENST00000466776 TCP11L1Q9NUJ3 509 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 POLR3EQ9NVU0 708 aa14.07□□□□□ -0.16
GTF3A-205ENST00000466776 CDH23Q9H251 3354 aa14.06□□□□□ -0.16
GTF3A-205ENST00000466776 KIAA1217Q5T5P2 1943 aa14.06□□□□□ -0.16
GTF3A-205ENST00000466776 SCN10AQ9Y5Y9 1956 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms