RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 CTAGE5O15320 804 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 ZEB2O60315 1214 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 NMT2O60551 498 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 PSRC1Q6PGN9 363 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-214ENST00000465399 DCAF4Q8WV16 495 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 PPP1R12CQ9BZL4 782 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 CYP39A1Q9NYL5 469 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 CCPG1Q9ULG6 757 aa16.79■□□□□ 0.28
ATG4B-214ENST00000465399 ASTN1O14525 1302 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 CABYRO75952 493 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 CSF2RAP15509 400 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 SNAP25P60880 206 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
ATG4B-214ENST00000465399 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 ANKRD45Q5TZF3 282 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 CXCL17Q6UXB2 119 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 NSMFQ6X4W1 530 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 TIFAQ96CG3 184 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
ATG4B-214ENST00000465399 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
ATG4B-214ENST00000465399 VCANP13611 3396 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 ORC4O43929 436 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 CD4P01730 458 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 ICAM1P05362 532 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 VPS53Q5VIR6 699 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 IQSEC1Q6DN90 963 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 RASGRP2Q7LDG7 609 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 FBXO16Q8IX29 292 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-214ENST00000465399 SEZ6LQ9BYH1 1024 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 ZNF576Q9H609 170 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 VTA1Q9NP79 307 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.28
ATG4B-214ENST00000465399 MYO9BQ13459 2157 aa16.77■□□□□ 0.27
ATG4B-214ENST00000465399 PRUNE2Q8WUY3 3088 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-214ENST00000465399 SMPD1P17405 629 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 NOVP48745 357 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 ITGA7Q13683 1181 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 ALX1Q15699 326 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
ATG4B-214ENST00000465399 C16orf59Q7L2K0 433 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 MTIF3Q9H2K0 278 aaKnown RBP16.76■□□□□ 0.27
ATG4B-214ENST00000465399 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
ATG4B-214ENST00000465399 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
ATG4B-214ENST00000465399 Q9Y3F1 56 aa16.76■□□□□ 0.27
ATG4B-214ENST00000465399 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 MYH6P13533 1939 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 FGRP09769 529 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 ACRP10323 421 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
ATG4B-214ENST00000465399 CYP2C18P33260 490 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 PDE1AP54750 535 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
ATG4B-214ENST00000465399 RASIP1Q5U651 963 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 TAPT1Q6NXT6 567 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 ZNF365Q70YC5 407 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 HIPK3Q9H422 1215 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 IL23AQ9NPF7 189 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 PDGFCQ9NRA1 345 aa16.75■□□□□ 0.27
ATG4B-214ENST00000465399 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
ATG4B-214ENST00000465399 FGAP02671 866 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 SLC16A2P36021 539 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 SYDE2Q5VT97 1194 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 BTNL9Q6UXG8 535 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 KIAA1211Q6ZU35 1233 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 TICAM2Q86XR7 235 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 MORC4Q8TE76 937 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 TMEM47Q9BQJ4 181 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 PBX4Q9BYU1 374 aa16.74■□□□□ 0.27
ATG4B-214ENST00000465399 ZMYM6O95789 1325 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-214ENST00000465399 LOC102724159A0A0B4J2E5 919 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 GRXCR1A8MXD5 290 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 PTGS1P23219 599 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 PBX2P40425 430 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 BAATQ14032 418 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-214ENST00000465399 PWP2Q15269 919 aaKnown RBP16.73■□□□□ 0.27
ATG4B-214ENST00000465399 TTBK2Q6IQ55 1244 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 SYMPKQ92797 1274 aaKnown RBP16.73■□□□□ 0.27
ATG4B-214ENST00000465399 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
ATG4B-214ENST00000465399 GAS2L1Q99501 681 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-214ENST00000465399 GPCPD1Q9NPB8 672 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 TCP11L1Q9NUJ3 509 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 PNMA2Q9UL42 364 aa16.73■□□□□ 0.27
ATG4B-214ENST00000465399 NFIBO00712 420 aa16.72■□□□□ 0.27
ATG4B-214ENST00000465399 HSPD1P10809 573 aaKnown RBP16.72■□□□□ 0.27
ATG4B-214ENST00000465399 ALDH5A1P51649 535 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms