RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 ERVK-24P63145 666 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 CCNA1P78396 465 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 CRHR2Q13324 411 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 Q3C1V9 767 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
C9orf78-203ENST00000461539 MCTP1Q6DN14 999 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 RIOX2Q8IUF8 465 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
C9orf78-203ENST00000461539 SHISA4Q96DD7 197 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 MOV10L1Q9BXT6 1211 aaKnown RBP11.23□□□□□ -0.61
C9orf78-203ENST00000461539 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 BRMS1Q9HCU9 246 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 MORF4L1Q9UBU8 362 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 ESYT2A0FGR8 921 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 TLR2O60603 784 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 SLC25A27O95847 323 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 MMP1P03956 469 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 ERCC3P19447 782 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 COPB2P35606 906 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
C9orf78-203ENST00000461539 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
C9orf78-203ENST00000461539 FAM110CQ1W6H9 321 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 MCF2L2Q86YR7 1114 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 DIS3L2Q8IYB7 885 aaKnown RBP11.22□□□□□ -0.61
C9orf78-203ENST00000461539 FAM177A1Q8N128 213 aaPredicted RBP11.22□□□□□ -0.61
C9orf78-203ENST00000461539 CHST13Q8NET6 341 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 CUL5Q93034 780 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 ZMYND12Q9H0C1 365 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 ACAD9Q9H845 621 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 OTOFQ9HC10 1997 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 PCDHA4Q9UN74 947 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 MTMR6Q9Y217 621 aa11.22□□□□□ -0.61
C9orf78-203ENST00000461539 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.61
C9orf78-203ENST00000461539 NFIBO00712 420 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 TRPA1O75762 1119 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
C9orf78-203ENST00000461539 TBC1D8O95759 1140 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 CFBP00751 764 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
C9orf78-203ENST00000461539 KRT2P35908 639 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 NUCB2P80303 420 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 PKP1Q13835 747 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 GALNT17Q6IS24 598 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 C17orf99Q6UX52 265 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 BICD2Q8TD16 824 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 GLT8D2Q9H1C3 349 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 PORCNQ9H237 461 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 EFCC1Q9HA90 598 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 RNF186Q9NXI6 227 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 FBXO40Q9UH90 709 aa11.21□□□□□ -0.61
C9orf78-203ENST00000461539 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.61
C9orf78-203ENST00000461539 ADGRA2Q96PE1 1338 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 BTBD18B2RXH4 712 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 OPLAHO14841 1288 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 BCRP11274 1271 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
C9orf78-203ENST00000461539 DDIT3P35638 169 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 NPY5RQ15761 445 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 UBE2SQ16763 222 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 JAKMIP3Q5VZ66 844 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 REXO1Q8N1G1 1221 aaKnown RBP11.2□□□□□ -0.62
C9orf78-203ENST00000461539 ANKRD35Q8N283 1001 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 DAGLBQ8NCG7 672 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 SHCBP1Q8NEM2 672 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 RASGRP4Q8TDF6 673 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 MROH8Q9H579 483 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 CHMP5Q9NZZ3 219 aa11.2□□□□□ -0.62
C9orf78-203ENST00000461539 BIN2Q9UBW5 565 aaPredicted RBP11.2□□□□□ -0.62
C9orf78-203ENST00000461539 KIF28PB7ZC32 967 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 ADAMTS3O15072 1205 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 BRD1O95696 1058 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 ZSCAN22P10073 491 aaPredicted RBP11.19□□□□□ -0.62
C9orf78-203ENST00000461539 MAP2K1Q02750 393 aaPredicted RBP11.19□□□□□ -0.62
C9orf78-203ENST00000461539 NR5A1Q13285 461 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
C9orf78-203ENST00000461539 KCTD2Q14681 263 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 SLC30A10Q6XR72 485 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 RNF207Q6ZRF8 634 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
C9orf78-203ENST00000461539 MMP19Q99542 508 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms