RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 GRIN2DO15399 1336 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 TTC41PQ6P2S7 1318 aa22.2■■□□□ 1.14
MSH6-206ENST00000455383 MUC3AQ02505 3323 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 SLC3A2P08195 630 aaKnown RBP22.19■■□□□ 1.14
MSH6-206ENST00000455383 SLC1A4P43007 532 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 ZMYM1Q5SVZ6 1142 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 TLK2Q86UE8 772 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 PI4K2BQ8TCG2 481 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 TRERF1Q96PN7 1200 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 Q9Y3F1 56 aa22.19■■□□□ 1.14
MSH6-206ENST00000455383 SMPD1P17405 629 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 MCCP23508 829 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 NOVP48745 357 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 ITGA7Q13683 1181 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 RAB30Q15771 203 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 FSCN1Q16658 493 aaKnown RBP22.18■■□□□ 1.14
MSH6-206ENST00000455383 PPP4R3BQ5MIZ7 849 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 RCSD1Q6JBY9 416 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 TAPT1Q6NXT6 567 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 MORC4Q8TE76 937 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 GAS2L1Q99501 681 aaPredicted RBP22.18■■□□□ 1.14
MSH6-206ENST00000455383 NAPBQ9H115 298 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 PRDM12Q9H4Q4 367 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 IL17RBQ9NRM6 502 aa22.18■■□□□ 1.14
MSH6-206ENST00000455383 CXXC1Q9P0U4 656 aaPredicted RBP22.18■■□□□ 1.14
MSH6-206ENST00000455383 UMODL1Q5DID0 1318 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 FOXP2O15409 715 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 MUM1L1Q5H9M0 696 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 IQSEC1Q6DN90 963 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 HIPK3Q9H422 1215 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 PDGFCQ9NRA1 345 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 CYP39A1Q9NYL5 469 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 PRR12Q9ULL5 1215 aa22.17■■□□□ 1.14
MSH6-206ENST00000455383 DYNC1LI2O43237 492 aaPredicted RBP22.16■■□□□ 1.14
MSH6-206ENST00000455383 FGBP02675 491 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 ALAS1P13196 640 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 PTGS1P23219 599 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 ADGRE1Q14246 886 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 KCTD1Q719H9 257 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 NOL8Q76FK4 1167 aaKnown RBP22.16■■□□□ 1.14
MSH6-206ENST00000455383 AP5M1Q9H0R1 490 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 DDX49Q9Y6V7 483 aaKnown RBP22.16■■□□□ 1.14
MSH6-206ENST00000455383 CHD9Q3L8U1 2897 aa22.16■■□□□ 1.14
MSH6-206ENST00000455383 ERC2O15083 957 aa22.15■■□□□ 1.14
MSH6-206ENST00000455383 ZEB2O60315 1214 aa22.15■■□□□ 1.14
MSH6-206ENST00000455383 ATXN2LQ8WWM7 1075 aaKnown RBP22.15■■□□□ 1.14
MSH6-206ENST00000455383 VWCEQ96DN2 955 aa22.15■■□□□ 1.14
MSH6-206ENST00000455383 NOC4LQ9BVI4 516 aaKnown RBP22.15■■□□□ 1.14
MSH6-206ENST00000455383 MTIF3Q9H2K0 278 aaKnown RBP22.15■■□□□ 1.14
MSH6-206ENST00000455383 MSRAQ9UJ68 235 aa22.15■■□□□ 1.14
MSH6-206ENST00000455383 STX8Q9UNK0 236 aa22.15■■□□□ 1.14
MSH6-206ENST00000455383 LCTP09848 1927 aa22.14■■□□□ 1.14
MSH6-206ENST00000455383 TNFRSF10AO00220 468 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 B4GALT4O60513 344 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 SNAP25P60880 206 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 IKQ13123 557 aaPredicted RBP22.14■■□□□ 1.13
MSH6-206ENST00000455383 TMEM63BQ5T3F8 832 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 RASGRP2Q7LDG7 609 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 FSD1Q9BTV5 496 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 TRPV6Q9H1D0 765 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 WNT8AQ9H1J5 351 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 VTA1Q9NP79 307 aa22.14■■□□□ 1.13
MSH6-206ENST00000455383 ISY1Q9ULR0 285 aaKnown RBP22.14■■□□□ 1.13
MSH6-206ENST00000455383 YBX2Q9Y2T7 364 aaKnown RBP22.14■■□□□ 1.13
MSH6-206ENST00000455383 NMT2O60551 498 aa22.13■■□□□ 1.13
MSH6-206ENST00000455383 FBXO16Q8IX29 292 aaPredicted RBP22.13■■□□□ 1.13
MSH6-206ENST00000455383 OTUD7AQ8TE49 926 aaPredicted RBP22.13■■□□□ 1.13
MSH6-206ENST00000455383 RANBP17Q9H2T7 1088 aaKnown RBP22.13■■□□□ 1.13
MSH6-206ENST00000455383 NKX2-4Q9H2Z4 354 aa22.13■■□□□ 1.13
MSH6-206ENST00000455383 INCENPQ9NQS7 918 aa22.13■■□□□ 1.13
MSH6-206ENST00000455383 ANAPC4Q9UJX5 808 aa22.13■■□□□ 1.13
MSH6-206ENST00000455383 TSPY2A6NKD2 308 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 ICAM1P05362 532 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 FGRP09769 529 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 CCL23P55773 120 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 EEPD1Q7L9B9 569 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 CHMP4CQ96CF2 233 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 PURBQ96QR8 312 aaKnown RBP22.12■■□□□ 1.13
MSH6-206ENST00000455383 CCPG1Q9ULG6 757 aa22.12■■□□□ 1.13
MSH6-206ENST00000455383 LOC102724159A0A0B4J2E5 919 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 PSMC6P62333 389 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 CTDSPL2Q05D32 466 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 PWP2Q15269 919 aaKnown RBP22.11■■□□□ 1.13
MSH6-206ENST00000455383 DUSP28Q4G0W2 176 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 BTNL9Q6UXG8 535 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 OTOP2Q7RTS6 562 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 PPM1EQ8WY54 764 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 ASB2Q96Q27 587 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 SLC28A3Q9HAS3 691 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 THEGQ9P2T0 379 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 GBF1Q92538 1859 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 MYO9BQ13459 2157 aa22.11■■□□□ 1.13
MSH6-206ENST00000455383 SALL3Q9BXA9 1300 aa22.1■■□□□ 1.13
MSH6-206ENST00000455383 ORC4O43929 436 aa22.1■■□□□ 1.13
MSH6-206ENST00000455383 NSMFQ6X4W1 530 aa22.1■■□□□ 1.13
MSH6-206ENST00000455383 KIAA1211Q6ZU35 1233 aa22.1■■□□□ 1.13
MSH6-206ENST00000455383 RPUSD2Q8IZ73 545 aaKnown RBP22.1■■□□□ 1.13
MSH6-206ENST00000455383 DCAF4Q8WV16 495 aa22.1■■□□□ 1.13
MSH6-206ENST00000455383 ALDH8A1Q9H2A2 487 aaPredicted RBP22.1■■□□□ 1.13
MSH6-206ENST00000455383 PCDHB15Q9Y5E8 787 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms