RNA–Protein interactions for RNA: ENST00000453828.1

AC099541.1-201, humanhuman

TSL 2 BASIC

Gene AC099541.1, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099541.1-201ENST00000453828 C9orf50Q5SZB4 431 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 IFIT1BQ5T764 474 aaKnown RBP13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 LBX2Q6XYB7 198 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 MYLIPQ8WY64 445 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 GTF3C6Q969F1 213 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 MKL1Q969V6 931 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 TMEM47Q9BQJ4 181 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 SPATC1LQ9H0A9 340 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 KANSL2Q9H9L4 492 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
AC099541.1-201ENST00000453828 ZNF236Q9UL36 1845 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 CCDC69A6NI79 296 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 SEPT4O43236 478 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 TOP1P11387 765 aaKnown RBP13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 PRAMEF19Q5SWL8 479 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 NECAB1Q8N987 351 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 RNPC3Q96LT9 517 aaKnown RBP13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 MAP3K14Q99558 947 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 ARHGEF10LQ9HCE6 1279 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
AC099541.1-201ENST00000453828 GREB1LQ9C091 1923 aaPredicted RBP13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 ZBTB43O43298 467 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 DDAH1O94760 285 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 TTLL1O95922 423 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 RARBP10826 455 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 FCER1AP12319 257 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 SCRN1Q12765 414 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 NFXL1Q6ZNB6 911 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 MB21D1Q8N884 522 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 SLKQ9H2G2 1235 aaPredicted RBP13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 PDLIM7Q9NR12 457 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
AC099541.1-201ENST00000453828 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 GOLGA8BA8MQT2 603 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 RAG1P15918 1043 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 DDIT3P35638 169 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 LRRC41Q15345 812 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 SYNE3Q6ZMZ3 975 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 FANCBQ8NB91 859 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 PNMA1Q8ND90 353 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 SHCBP1Q8NEM2 672 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 MROH8Q9H579 483 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 KAT14Q9H8E8 782 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 XPNPEP3Q9NQH7 507 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 STX8Q9UNK0 236 aa13.54□□□□□ -0.24
AC099541.1-201ENST00000453828 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 COBLO75128 1261 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CLTBP09497 229 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CALM1P0DP23 149 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CALM2P0DP24 149 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CALM3P0DP25 149 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 EEF2P13639 858 aaKnown RBP13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 DSG3P32926 999 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 TLE2Q04725 743 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 ICA1Q05084 483 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 STK3Q13188 491 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 KCTD2Q14681 263 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 NTRK3Q16288 839 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 SH3RF1Q7Z6J0 888 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 RNF180Q86T96 592 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CLEC10AQ8IUN9 316 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 MMP19Q99542 508 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 LLPHQ9BRT6 129 aaKnown RBP13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 NCOA5Q9HCD5 579 aaKnown RBP13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
AC099541.1-201ENST00000453828 DNAH12Q6ZR08 3092 aa13.52□□□□□ -0.24
AC099541.1-201ENST00000453828 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 TRIM43BA6NCK2 446 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 SNHG28P0DPA3 235 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 CDC27P30260 824 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 ADD1P35611 737 aaKnown RBP13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 METAP2P50579 478 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 MICU3Q86XE3 530 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 TRIM43Q96BQ3 446 aaPredicted RBP13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 MAML3Q96JK9 1138 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.25
AC099541.1-201ENST00000453828 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms