RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 BLOC1S4Q9NUP1 217 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 KLRG2A4D1S0 409 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 SASH1O94885 1247 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 STARD3NLO95772 234 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 CYP19A1P11511 503 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 KIF5BP33176 963 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 KRT20P35900 424 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 UBXN2AP68543 259 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 SLC7A5Q01650 507 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 FAM98CQ17RN3 349 aaKnown RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 PLBD1Q6P4A8 553 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 USP33Q8TEY7 942 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 UROC1Q96N76 676 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 DESI2Q9BSY9 194 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 POLR3CQ9BUI4 534 aaPredicted RBP8.87□□□□□ -0.99
BRCC3-208ENST00000453705 GTF3C4Q9UKN8 822 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 DGKBQ9Y6T7 804 aa8.87□□□□□ -0.99
BRCC3-208ENST00000453705 C4AP0C0L4 1744 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 C4BP0C0L5 1744 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 PALLDQ8WX93 1383 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 FRAT2O75474 233 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-208ENST00000453705 ARIH2O95376 493 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 CSF1RP07333 972 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 RAC2P15153 192 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 SMARCA1P28370 1054 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-208ENST00000453705 PTPN12Q05209 780 aaKnown RBP8.86□□□□□ -0.99
BRCC3-208ENST00000453705 INF2Q27J81 1249 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 GALNT5Q7Z7M9 940 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 SMCR8Q8TEV9 937 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-208ENST00000453705 TRIM8Q9BZR9 551 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 RBSNQ9H1K0 784 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 OBP2AQ9NY56 170 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
BRCC3-208ENST00000453705 IFIT1P09914 478 aaKnown RBP8.86□□□□□ -0.99
BRCC3-208ENST00000453705 MAPK9P45984 424 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 APBA1Q02410 837 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 NR6A1Q15406 480 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 KRT26Q7Z3Y9 468 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 MAGEB6Q8N7X4 407 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 ZBTB10Q96DT7 871 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 SLC7A5P2Q9GIP4 190 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 AASDHPPTQ9NRN7 309 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 VPS45Q9NRW7 570 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 HOXC10Q9NYD6 342 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 SLC4A7Q9Y6M7 1214 aa8.86□□□□□ -0.99
BRCC3-208ENST00000453705 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 MED23Q9ULK4 1368 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 FSD2A1L4K1 749 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 SPTLC2O15270 562 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 SGSM2O43147 1006 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 TRIM37O94972 964 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 PICALMQ13492 652 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 GALEQ14376 348 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 CPLX2Q6PUV4 134 aaKnown RBP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 STRA8Q7Z7C7 330 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 C1orf216Q8TAB5 229 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 FBF1Q8TES7 1133 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 HLA-CQ95604 372 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 BARD1Q99728 777 aaKnown RBP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 FAM167BQ9BTA0 163 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 CHMP5Q9NZZ3 219 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 V9GYY5 206 aaPredicted RBP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 MBD4O95243 580 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 PYGLP06737 847 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 ATP5JP18859 108 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 CAPN3P20807 821 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 SEPHS1P49903 392 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 G3BP1Q13283 466 aaKnown RBP eCLIP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 CBX2Q14781 532 aaPredicted RBP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 NUGGCQ68CJ6 796 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 NAT8LQ8N9F0 302 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 MARCH10Q8NA82 808 aaPredicted RBP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 PJA1Q8NG27 643 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 JAKMIP2Q96AA8 810 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 CHCHD3Q9NX63 227 aaKnown RBP8.85□□□□□ -0.99
BRCC3-208ENST00000453705 SIRPGQ9P1W8 387 aa8.85□□□□□ -0.99
BRCC3-208ENST00000453705 A0A0G2JS52 829 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 GALNSP34059 522 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 HSPA4P34932 840 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 STAT3P40763 770 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 SEPT6Q14141 434 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 ERFEQ4G0M1 354 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 EPHA10Q5JZY3 1008 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 ZNF772Q68DY9 489 aaPredicted RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 MZT2AQ6P582 158 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 STRBPQ96SI9 672 aaKnown RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 KCTD5Q9NXV2 234 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 PFDN2Q9UHV9 154 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 ZNF180Q9UJW8 692 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 BHMG1C9JSJ3 638 aaPredicted RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 CSPG5O95196 566 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 IL15P40933 162 aaPredicted RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 RXRGP48443 463 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 FAM102BQ5T8I3 360 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 KLHL10Q6JEL2 608 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 SWSAP1Q6NVH7 229 aa8.84□□□□□ -0.99
BRCC3-208ENST00000453705 HIBCHQ6NVY1 386 aaPredicted RBP8.84□□□□□ -0.99
BRCC3-208ENST00000453705 ATXN2LQ8WWM7 1075 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms