RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NR2E3Q9Y5X4 410 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 IFIT3O14879 490 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 EVI5O60447 810 aa16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 BAATQ14032 418 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 GPHNQ9NQX3 736 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 DDX49Q9Y6V7 483 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-204ENST00000449062 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 ADCY6O43306 1168 aa16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 ADAMTS4O75173 837 aa16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 AKR1A1P14550 325 aa16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 LRRC26Q2I0M4 334 aa16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 CCSAPQ6IQ19 270 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 NSMFQ6X4W1 530 aa16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 RALYLQ86SE5 291 aaKnown RBP16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
RTFDC1-204ENST00000449062 ASB14A6NK59 587 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 CDC45O75419 566 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 RARBP10826 455 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 NKX3-2P78367 333 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 GRM4Q14833 912 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 CDC37Q16543 378 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 KLHDC9Q8NEP7 349 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 TBC1D5Q92609 795 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 LENG1Q96BZ8 264 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 MAF1Q9H063 256 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 RIOX1Q9H6W3 641 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 ANO2Q9NQ90 1003 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 COLQQ9Y215 455 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-204ENST00000449062 CTAGE5O15320 804 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 DUSP11O75319 330 aaKnown RBP16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 PGK1P00558 417 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 WTAPQ15007 396 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 TMEM67Q5HYA8 995 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 TAPT1Q6NXT6 567 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 PHF24Q9UPV7 400 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
RTFDC1-204ENST00000449062 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 PRC1O43663 620 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 CYTH3O43739 400 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 ADCYAP1R1P41586 468 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 RPS6P62753 249 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 SLC39A5Q6ZMH5 540 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 RNF207Q6ZRF8 634 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 KCNB2Q92953 911 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 UPF3AQ9H1J1 476 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-204ENST00000449062 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 ERICH2A1L162 156 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 SH2B2O14492 632 aaPredicted RBP16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 OPLAHO14841 1288 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 NEFLP07196 543 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 EDNRBP24530 442 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 MCM5P33992 734 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 GJA9P57773 515 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 GHRHRQ02643 423 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 SART3Q15020 963 aaKnown RBP16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 SNX17Q15036 470 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 C1orf53Q5VUE5 145 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 FBXO11Q86XK2 927 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 TSEN34Q9BSV6 310 aaKnown RBP16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 MCM3APO60318 1980 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
RTFDC1-204ENST00000449062 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 RBM47A0AV96 593 aaKnown RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 PTPDC1A2A3K4 754 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 KBTBD13C9JR72 458 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 ZBTB5O15062 677 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 CST5P28325 142 aaPredicted RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 LIFRP42702 1097 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 ALDH5A1P51649 535 aaPredicted RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 ATN1P54259 1190 aaPredicted RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 USH1GQ495M9 461 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 RNF180Q86T96 592 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms