RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 OGFOD1Q8N543 542 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 NUP88Q99567 741 aaPredicted RBP19.74■□□□□ 0.75
SMC6-206ENST00000446852 IMPACTQ9P2X3 320 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 HDAC9Q9UKV0 1011 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 SERPINC1P01008 464 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 UBASH3AP57075 661 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 ORC2Q13416 577 aaPredicted RBP19.74■□□□□ 0.75
SMC6-206ENST00000446852 RBM26Q5T8P6 1007 aaKnown RBP19.74■□□□□ 0.75
SMC6-206ENST00000446852 GMCL1P1Q8NEA9 526 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 VPS33BQ9H267 617 aa19.74■□□□□ 0.75
SMC6-206ENST00000446852 TDP2O95551 362 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 SPDYE2Q495Y8 402 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 NIM1KQ8IY84 436 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 CUL5Q93034 780 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 PIM2Q9P1W9 311 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 HERC5Q9UII4 1024 aaKnown RBP19.73■□□□□ 0.75
SMC6-206ENST00000446852 UTRNP46939 3433 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 PPP1R3GB7ZBB8 358 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 SLC37A4O43826 429 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 NDUFB10O96000 172 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 TNNI2P48788 182 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 RRAGBQ5VZM2 374 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 FAM151AQ8WW52 585 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 AK8Q96MA6 479 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 PLIN2Q99541 437 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMC6-206ENST00000446852 INTS13Q9NVM9 706 aa19.73■□□□□ 0.75
SMC6-206ENST00000446852 A0A1W2PRG0 241 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 CCZ1BP86790 482 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 CCZ1P86791 482 aaPredicted RBP19.72■□□□□ 0.75
SMC6-206ENST00000446852 CDC37Q16543 378 aaPredicted RBP19.72■□□□□ 0.75
SMC6-206ENST00000446852 KLHL10Q6JEL2 608 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 CDAN1Q8IWY9 1227 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 RASSF8Q8NHQ8 419 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 GMCL1Q96IK5 515 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 MTMR9Q96QG7 549 aa19.72■□□□□ 0.75
SMC6-206ENST00000446852 SAMSN1Q9NSI8 373 aaKnown RBP19.72■□□□□ 0.75
SMC6-206ENST00000446852 R3HCC1Q9Y3T6 440 aaKnown RBP19.72■□□□□ 0.75
SMC6-206ENST00000446852 TECP42680 631 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 CXCL9Q07325 125 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
SMC6-206ENST00000446852 PSTPIP2Q9H939 334 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 ATF5Q9Y2D1 282 aaPredicted RBP19.71■□□□□ 0.75
SMC6-206ENST00000446852 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 SMCHD1A6NHR9 2005 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 TMEM232C9JQI7 657 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 CBFA2T2O43439 604 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 GSDMDP57764 484 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 TGFB2P61812 414 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 CABP7Q86V35 215 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 IGSF22Q8N9C0 903 aa19.71■□□□□ 0.75
SMC6-206ENST00000446852 RPN1P04843 607 aaKnown RBP19.7■□□□□ 0.74
SMC6-206ENST00000446852 MRPL12P52815 198 aaKnown RBP19.7■□□□□ 0.74
SMC6-206ENST00000446852 STX17P56962 302 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 ARMCX5Q6P1M9 558 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 AGBL3Q8NEM8 1001 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 MMTAG2Q9BU76 263 aaKnown RBP19.7■□□□□ 0.74
SMC6-206ENST00000446852 VEZTQ9HBM0 779 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 PLCG1P19174 1290 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 CALCRLQ16602 461 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 PTPN21Q16825 1174 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 KBTBD4Q9NVX7 518 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 PCDHA1Q9Y5I3 950 aa19.7■□□□□ 0.74
SMC6-206ENST00000446852 TXKP42681 527 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 SNAP25P60880 206 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 MTMR14Q8NCE2 650 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 TMEM39BQ9GZU3 492 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L15C9J2P7 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L13C9JLJ4 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L11C9JVI0 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L18D6R9N7 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L22D6RA61 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L17D6RBQ6 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L19D6RCP7 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L20D6RJB6 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 SKILP12757 684 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L24Q0WX57 530 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 DNTTIP2Q5QJE6 756 aaKnown RBP19.69■□□□□ 0.74
SMC6-206ENST00000446852 USP17L6PQ6QN14 398 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 VSTM4Q8IW00 320 aa19.69■□□□□ 0.74
SMC6-206ENST00000446852 ECE1P42892 770 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
SMC6-206ENST00000446852 SPATA1Q5VX52 437 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 SHTN1A0MZ66 631 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 BMP3P12645 472 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 PPP4R3AQ6IN85 833 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 SPICE1Q8N0Z3 855 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 ZBED3Q96IU2 234 aaPredicted RBP19.68■□□□□ 0.74
SMC6-206ENST00000446852 CTNND2Q9UQB3 1225 aa19.68■□□□□ 0.74
SMC6-206ENST00000446852 CDK11BP21127 795 aaKnown RBP19.67■□□□□ 0.74
SMC6-206ENST00000446852 FXR2P51116 673 aaKnown RBP eCLIP19.67■□□□□ 0.741e-6■□□□□ 8.7
SMC6-206ENST00000446852 ZNF658Q5TYW1 1059 aaPredicted RBP19.67■□□□□ 0.74
SMC6-206ENST00000446852 FKBP1CQ5VVH2 108 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 TAOK3Q9H2K8 898 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 RMND1Q9NWS8 449 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 GDAQ9Y2T3 454 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 ATAD5Q96QE3 1844 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 KLRC4O43908 158 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 NBPF9Q3BBW0 867 aa19.67■□□□□ 0.74
SMC6-206ENST00000446852 KIAA1755Q5JYT7 1200 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms