RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 IRX5P78411 483 aaPredicted RBP20.32■□□□□ 0.84
SDCCAG3-206ENST00000446833 NOL8Q76FK4 1167 aaKnown RBP20.32■□□□□ 0.84
SDCCAG3-206ENST00000446833 MAFAQ8NHW3 353 aaPredicted RBP20.32■□□□□ 0.84
SDCCAG3-206ENST00000446833 CYP39A1Q9NYL5 469 aa20.32■□□□□ 0.84
SDCCAG3-206ENST00000446833 GNEQ9Y223 722 aaKnown RBP20.32■□□□□ 0.84
SDCCAG3-206ENST00000446833 TTC28Q96AY4 2481 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 ICAM1P05362 532 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 IQSEC1Q6DN90 963 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 FAM126BQ8IXS8 530 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 TMEM199Q8N511 208 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 CCPG1Q9ULG6 757 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 Q9Y3F1 56 aa20.31■□□□□ 0.84
SDCCAG3-206ENST00000446833 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 ZEB2O60315 1214 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 PDE1AP54750 535 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 HDAC1Q13547 482 aaPredicted RBP20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 FSCN1Q16658 493 aaKnown RBP20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 MUM1L1Q5H9M0 696 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 BTNL9Q6UXG8 535 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 TLK2Q86UE8 772 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 SLC43A3Q8NBI5 491 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 MYLIPQ8WY64 445 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 CHMP4CQ96CF2 233 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.3■□□□□ 0.842e-11■□□□□ 8.7
SDCCAG3-206ENST00000446833 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 TCP11L1Q9NUJ3 509 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 CHD9Q3L8U1 2897 aa20.3■□□□□ 0.84
SDCCAG3-206ENST00000446833 ASTN1O14525 1302 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 LOC102724159A0A0B4J2E5 919 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 CD4P01730 458 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 FGAP02671 866 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 FOSL2P15408 326 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 DNAJB2P25686 324 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 BEX3Q00994 111 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 PWP2Q15269 919 aaKnown RBP20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 CCDC96Q2M329 555 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 MORC4Q8TE76 937 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 COL25A1Q9BXS0 654 aaPredicted RBP20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 RANBP17Q9H2T7 1088 aaKnown RBP20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 VTA1Q9NP79 307 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
SDCCAG3-206ENST00000446833 ZMYM6O95789 1325 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 SMPD1P17405 629 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 SNAP25P60880 206 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 TMEM240Q5SV17 173 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 RASIP1Q5U651 963 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 TAPT1Q6NXT6 567 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 CXCL17Q6UXB2 119 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 NSMFQ6X4W1 530 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 C16orf59Q7L2K0 433 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 TOMM22Q9NS69 142 aa20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 ADD3Q9UEY8 706 aaKnown RBP20.28■□□□□ 0.84
SDCCAG3-206ENST00000446833 DYNC1LI2O43237 492 aaPredicted RBP20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 PCP11498 1178 aaKnown RBP20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 CSF2RAP15509 400 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 ITGA7Q13683 1181 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 SYDE2Q5VT97 1194 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 PSRC1Q6PGN9 363 aaPredicted RBP20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 RASGRP2Q7LDG7 609 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 FAM227BQ96M60 508 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 TMEM47Q9BQJ4 181 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 MTMR7Q9Y216 660 aa20.27■□□□□ 0.84
SDCCAG3-206ENST00000446833 HSPD1P10809 573 aaKnown RBP20.26■□□□□ 0.83
SDCCAG3-206ENST00000446833 TIFAQ96CG3 184 aa20.26■□□□□ 0.83
SDCCAG3-206ENST00000446833 TTC14Q96N46 770 aa20.26■□□□□ 0.83
SDCCAG3-206ENST00000446833 CRBNQ96SW2 442 aa20.26■□□□□ 0.83
SDCCAG3-206ENST00000446833 PDGFCQ9NRA1 345 aa20.26■□□□□ 0.83
SDCCAG3-206ENST00000446833 A0A0D9SFI3 127 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 SLC16A2P36021 539 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 AAMPQ13685 434 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 BAATQ14032 418 aaPredicted RBP20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 GRIN2CQ14957 1233 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 TTBK2Q6IQ55 1244 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 KIAA1211Q6ZU35 1233 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 EEPD1Q7L9B9 569 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 FBXO16Q8IX29 292 aaPredicted RBP20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 PPP1R12CQ9BZL4 782 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 ZNF576Q9H609 170 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 IL23AQ9NPF7 189 aa20.25■□□□□ 0.83
SDCCAG3-206ENST00000446833 SPTBN5Q9NRC6 3674 aaKnown RBP20.24■□□□□ 0.83
SDCCAG3-206ENST00000446833 DUSP28Q4G0W2 176 aa20.24■□□□□ 0.83
SDCCAG3-206ENST00000446833 ZNF365Q70YC5 407 aa20.24■□□□□ 0.83
SDCCAG3-206ENST00000446833 HIPK3Q9H422 1215 aa20.24■□□□□ 0.83
SDCCAG3-206ENST00000446833 GRIN2DO15399 1336 aa20.24■□□□□ 0.83
SDCCAG3-206ENST00000446833 PDHBP11177 359 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 CYP2C18P33260 490 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 NT5C2P49902 561 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 ALDH5A1P51649 535 aaPredicted RBP20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 MFAP1P55081 439 aaKnown RBP20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 MYO9BQ13459 2157 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 AKNAD1Q5T1N1 836 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 MFSD6Q6ZSS7 791 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 PURBQ96QR8 312 aaKnown RBP20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 MTIF3Q9H2K0 278 aaKnown RBP20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms