RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SEC23AQ15436 765 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 C1orf53Q5VUE5 145 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 CYB5R4Q7L1T6 521 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 RNF180Q86T96 592 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 KLHDC9Q8NEP7 349 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 KAT14Q9H8E8 782 aa22.18■■□□□ 1.14
HMGB3P22-201ENST00000442010 ASB14A6NK59 587 aa22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 NFIBO00712 420 aa22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 DUSP11O75319 330 aaKnown RBP22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 MYCNP04198 464 aaPredicted RBP22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 MAGEA10P43363 369 aaPredicted RBP22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 CCSAPQ6IQ19 270 aaPredicted RBP22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 PURBQ96QR8 312 aaKnown RBP22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 CPVLQ9H3G5 476 aa22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 TAF6LQ9Y6J9 622 aa22.17■■□□□ 1.14
HMGB3P22-201ENST00000442010 NSMFQ6X4W1 530 aa22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 MORC4Q8TE76 937 aa22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 MAP4K1Q92918 833 aa22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 FERMT2Q96AC1 680 aa22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 TSEN34Q9BSV6 310 aaKnown RBP22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 UBA5Q9GZZ9 404 aa22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 PNMA2Q9UL42 364 aa22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 DDX49Q9Y6V7 483 aaKnown RBP22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 U3KPZ7 1027 aaPredicted RBP22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 BAZ2BQ9UIF8 2168 aaKnown RBP22.16■■□□□ 1.14
HMGB3P22-201ENST00000442010 MYADML2A6NDP7 307 aa22.15■■□□□ 1.14
HMGB3P22-201ENST00000442010 CST5P28325 142 aaPredicted RBP22.15■■□□□ 1.14
HMGB3P22-201ENST00000442010 BAATQ14032 418 aaPredicted RBP22.15■■□□□ 1.14
HMGB3P22-201ENST00000442010 ASPRV1Q53RT3 343 aa22.15■■□□□ 1.14
HMGB3P22-201ENST00000442010 UBAC1Q9BSL1 405 aa22.15■■□□□ 1.14
HMGB3P22-201ENST00000442010 UPF3AQ9H1J1 476 aaKnown RBP22.15■■□□□ 1.14
HMGB3P22-201ENST00000442010 GJA9P57773 515 aa22.14■■□□□ 1.13
HMGB3P22-201ENST00000442010 NKX3-2P78367 333 aa22.14■■□□□ 1.13
HMGB3P22-201ENST00000442010 IRX5P78411 483 aaPredicted RBP22.14■■□□□ 1.13
HMGB3P22-201ENST00000442010 TRIM60Q495X7 471 aa22.14■■□□□ 1.13
HMGB3P22-201ENST00000442010 STOX1Q6ZVD7 989 aa22.14■■□□□ 1.13
HMGB3P22-201ENST00000442010 CENPQQ7L2Z9 268 aaPredicted RBP22.14■■□□□ 1.13
HMGB3P22-201ENST00000442010 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 A0A1W2PQ45 241 aaPredicted RBP22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 A0A1W2PQY0 241 aa22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 CTAGE5O15320 804 aa22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 IFIT1BQ5T764 474 aaKnown RBP22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 SKAP1Q86WV1 359 aa22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 ADGRF4Q8IZF3 695 aa22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 ATP11BQ9Y2G3 1177 aa22.13■■□□□ 1.13
HMGB3P22-201ENST00000442010 MOXD2PA6NHM9 499 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 E7EWF7 191 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 PARP1P09874 1014 aaKnown RBP22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 ALDH5A1P51649 535 aaPredicted RBP22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 ACLYP53396 1101 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 TRDNQ13061 729 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 KCNA10Q16322 511 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 CDC37Q16543 378 aaPredicted RBP22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 TAPT1Q6NXT6 567 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 SLC30A10Q6XR72 485 aa22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 GNEQ9Y223 722 aaKnown RBP22.12■■□□□ 1.13
HMGB3P22-201ENST00000442010 LOC102724159A0A0B4J2E5 919 aa22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 RPS6P62753 249 aaKnown RBP22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 PWP2Q15269 919 aaKnown RBP22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 RNF207Q6ZRF8 634 aa22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 STAG2Q8N3U4 1231 aa22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 LSG1Q9H089 658 aaKnown RBP22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 JMJD4Q9H9V9 463 aa22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 PDGFCQ9NRA1 345 aa22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 ADD3Q9UEY8 706 aaKnown RBP22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 RBM8AQ9Y5S9 174 aaKnown RBP22.11■■□□□ 1.13
HMGB3P22-201ENST00000442010 PTPDC1A2A3K4 754 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 SOX1O00570 391 aaPredicted RBP22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 C6orf222P0C671 652 aaPredicted RBP22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 MDM2Q00987 491 aaPredicted RBP22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 TNFAIP2Q03169 654 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 FBXO16Q8IX29 292 aaPredicted RBP22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 RGS22Q8NE09 1264 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 NCOA7Q8NI08 942 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 SENP2Q9HC62 589 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 PDLIM7Q9NR12 457 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 MAD2L2Q9UI95 211 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 KIAA1217Q5T5P2 1943 aa22.1■■□□□ 1.13
HMGB3P22-201ENST00000442010 PALM3A6NDB9 673 aaPredicted RBP22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 SMPD1P17405 629 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 ANTXR2P58335 489 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 TLE2Q04725 743 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 QRICH1Q2TAL8 776 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 USH1GQ495M9 461 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 BMP2KLQ5H9B9 411 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 EEPD1Q7L9B9 569 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 MB21D2Q8IYB1 491 aaPredicted RBP22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 MTMR8Q96EF0 704 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 ESYT1Q9BSJ8 1104 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 UBE2OQ9C0C9 1292 aaKnown RBP22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 MAF1Q9H063 256 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 VTA1Q9NP79 307 aa22.09■■□□□ 1.13
HMGB3P22-201ENST00000442010 ASGR1P07306 291 aa22.08■■□□□ 1.13
HMGB3P22-201ENST00000442010 PTGS1P23219 599 aa22.08■■□□□ 1.13
HMGB3P22-201ENST00000442010 EDNRBP24530 442 aa22.08■■□□□ 1.13
HMGB3P22-201ENST00000442010 CALML3P27482 149 aa22.08■■□□□ 1.13
HMGB3P22-201ENST00000442010 TMEM63BQ5T3F8 832 aa22.08■■□□□ 1.13
HMGB3P22-201ENST00000442010 IQSEC1Q6DN90 963 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms