RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 TSEN34Q9BSV6 310 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 MXD3Q9BW11 206 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 SCAND2PQ9GZW5 306 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 EHD4Q9H223 541 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 KAT14Q9H8E8 782 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 KCNQ5Q9NR82 932 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF277Q9NRM2 450 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 ORC3Q9UBD5 711 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 PI4KBQ9UBF8 816 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 SAP30BPQ9UHR5 308 aaKnown RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 DACH1Q9UI36 760 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 SERPINB13Q9UIV8 391 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 CFAP45Q9UL16 551 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TACC3Q9Y6A5 838 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 TNKSO95271 1327 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 STK36Q9NRP7 1315 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 COL2A1P02458 1487 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 MYH15Q9Y2K3 1946 aa4.6□□□□□ -1.67
HMGB1P37-201ENST00000439613 YDJCA8MPS7 323 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L15C9J2P7 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L10C9JJH3 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L13C9JLJ4 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L11C9JVI0 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L18D6R9N7 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L22D6RA61 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L17D6RBQ6 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L19D6RCP7 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L20D6RJB6 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PSMD14O00487 310 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PRPF3O43395 683 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 MYO1BO43795 1136 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PRPF40AO75400 957 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PRDM1O75626 825 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 RAD17O75943 681 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 ELP1O95163 1332 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 DEXIO95424 95 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 ADH1AP07327 375 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 TOP1P11387 765 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 BMP1P13497 986 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 FDPSP14324 419 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 XBP1P17861 261 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 SMARCA1P28370 1054 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PTGIRP43119 386 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PLCD1P51178 756 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 EIF6P56537 245 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 KRT85P78386 507 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 RELBQ01201 579 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 USP17L24Q0WX57 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 TROAPQ12815 778 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PICALMQ13492 652 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 SAFBQ15424 915 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 NTRK3Q16288 839 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 KLHL40Q2TBA0 621 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 CFAP100Q494V2 611 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 FAM47AQ5JRC9 791 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 FOXD4L5Q5VV16 416 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 CIAPIN1Q6FI81 312 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 RCSD1Q6JBY9 416 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 CYP2U1Q7Z449 544 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 BRAPQ7Z569 592 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 MICU3Q86XE3 530 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 STK11IPQ8N1F8 1099 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 CRACR2BQ8N4Y2 399 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 KDF1Q8NAX2 398 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 TPCN2Q8NHX9 752 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 CTCFLQ8NI51 663 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 STK32AQ8WU08 396 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 NUP133Q8WUM0 1156 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 FOXD4L4Q8WXT5 416 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 DPF2Q92785 391 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 SYAP1Q96A49 352 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 DYNLL2Q96FJ2 89 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 GMLQ99445 158 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 RNF26Q9BY78 433 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 OSBPL5Q9H0X9 879 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 ZNF395Q9H8N7 513 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 SENP2Q9HC62 589 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 ATP13A2Q9NQ11 1180 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 LMBRD1Q9NUN5 540 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 DNAAF2Q9NVR5 837 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 DICER1Q9UPY3 1922 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 BCS1LQ9Y276 419 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 PCDHGA11Q9Y5H2 935 aa4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 DDX49Q9Y6V7 483 aaKnown RBP4.59□□□□□ -1.67
HMGB1P37-201ENST00000439613 ATRNL1Q5VV63 1379 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 PLIN4Q96Q06 1357 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 GOLGA6L4A6NEF3 574 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 SFI1A8K8P3 1242 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 LCE2BO14633 110 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 GNRH1P01148 92 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 BMP2P12643 396 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 CDC27P30260 824 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 NOVP48745 357 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 TNNI2P48788 182 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ATP1A2P50993 1020 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZNF280AP59817 542 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 UBE2HP62256 183 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 GABPAQ06546 454 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 CXCL9Q07325 125 aa4.58□□□□□ -1.68
HMGB1P37-201ENST00000439613 GNL2Q13823 731 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms