RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 LONRF3Q496Y0 759 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 PDCL2Q8N4E4 241 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 CLIC6Q96NY7 704 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 FBXO2Q9UK22 296 aaPredicted RBP17.8■□□□□ 0.44
TVP23C-203ENST00000428082 UBASH3AP57075 661 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
TVP23C-203ENST00000428082 MLKLQ8NB16 471 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 ZNF408Q9H9D4 720 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 GINM1Q9NU53 330 aa17.8■□□□□ 0.44
TVP23C-203ENST00000428082 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 USP17L5A8MUK1 530 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 PRPF3O43395 683 aaKnown RBP17.79■□□□□ 0.44
TVP23C-203ENST00000428082 IREB2P48200 963 aaKnown RBP17.79■□□□□ 0.44
TVP23C-203ENST00000428082 TOB1P50616 345 aaPredicted RBP17.79■□□□□ 0.44
TVP23C-203ENST00000428082 TTLL12Q14166 644 aaPredicted RBP17.79■□□□□ 0.44
TVP23C-203ENST00000428082 POSTNQ15063 836 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 NT5DC1Q5TFE4 455 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 CMTR1Q8N1G2 835 aaKnown RBP17.79■□□□□ 0.44
TVP23C-203ENST00000428082 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
TVP23C-203ENST00000428082 ARHGEF10LQ9HCE6 1279 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 KCNJ14Q9UNX9 436 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 PCDHA5Q9Y5H7 936 aa17.79■□□□□ 0.44
TVP23C-203ENST00000428082 PDHBP11177 359 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 PTPRAP18433 802 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 KRT2P35908 639 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 MAP3K9P80192 1104 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 VGLL4Q14135 290 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 GRM4Q14833 912 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 NOL9Q5SY16 702 aaKnown RBP17.78■□□□□ 0.44
TVP23C-203ENST00000428082 STAG2Q8N3U4 1231 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 PICK1Q9NRD5 415 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 RAD21O60216 631 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 PLEKHA8P1O95397 391 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 MDM2Q00987 491 aaPredicted RBP17.78■□□□□ 0.44
TVP23C-203ENST00000428082 USP17L2Q6R6M4 530 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 SMARCE1Q969G3 411 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 TMX2Q9Y320 296 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 SNCAIPQ9Y6H5 919 aa17.78■□□□□ 0.44
TVP23C-203ENST00000428082 TRIM75PA6NK02 468 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 F5H6K3 240 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 KIF3CO14782 793 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 ITGBL1O95965 494 aaPredicted RBP17.77■□□□□ 0.44
TVP23C-203ENST00000428082 SNHG28P0DPA3 235 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 KLRC3Q07444 240 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 ARMCX5Q6P1M9 558 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 ZNF592Q92610 1267 aa17.77■□□□□ 0.44
TVP23C-203ENST00000428082 CGNQ9P2M7 1197 aaKnown RBP17.77■□□□□ 0.44
TVP23C-203ENST00000428082 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.43
TVP23C-203ENST00000428082 ZYXQ15942 572 aaKnown RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 TMTC3Q6ZXV5 915 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 FCHSD1Q86WN1 690 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 GMCL1P1Q8NEA9 526 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 TSC1Q92574 1164 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 CLMNQ96JQ2 1002 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 KIF5BP33176 963 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 SLFN13Q68D06 897 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 ISM2Q6H9L7 571 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 ARMC9Q7Z3E5 817 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 VSTM4Q8IW00 320 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 ANKRD13AQ8IZ07 590 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 SRBD1Q8N5C6 995 aaKnown RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 ENOX1Q8TC92 643 aaKnown RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 PYM1Q9BRP8 204 aaKnown RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 PHF20Q9BVI0 1012 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 HSD3B7Q9H2F3 369 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 CSADQ9Y600 493 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
TVP23C-203ENST00000428082 FRMPD2Q68DX3 1309 aaPredicted RBP17.76■□□□□ 0.43
TVP23C-203ENST00000428082 USP27XA6NNY8 438 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 UBE2Q2LH0YL09 131 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
TVP23C-203ENST00000428082 NDUFB10O96000 172 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 SARSP49591 514 aaKnown RBP17.75■□□□□ 0.43
TVP23C-203ENST00000428082 FUT2Q10981 343 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 SPICE1Q8N0Z3 855 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 MAN1B1Q9UKM7 699 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 SYNPO2Q9UMS6 1093 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 PCDHB6Q9Y5E3 794 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 MYH6P13533 1939 aa17.75■□□□□ 0.43
TVP23C-203ENST00000428082 CELF2O95319 508 aaKnown RBP17.74■□□□□ 0.43
TVP23C-203ENST00000428082 ERCC5P28715 1186 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-203ENST00000428082 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 NCBP1Q09161 790 aaKnown RBP17.74■□□□□ 0.43
TVP23C-203ENST00000428082 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 ERO1AQ96HE7 468 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 NUP88Q99567 741 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-203ENST00000428082 FEZ1Q99689 392 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 WDR18Q9BV38 432 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 SH2D4AQ9H788 454 aa17.74■□□□□ 0.43
TVP23C-203ENST00000428082 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms