RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 CMTR1Q8N1G2 835 aaKnown RBP11.51□□□□□ -0.57
HDLBP-209ENST00000422933 CCDC148Q8NFR7 591 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 MPHOSPH6Q99547 160 aaKnown RBP11.51□□□□□ -0.57
HDLBP-209ENST00000422933 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
HDLBP-209ENST00000422933 RLFQ13129 1914 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 B4DLN1 442 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
HDLBP-209ENST00000422933 BCRP11274 1271 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 FCER1AP12319 257 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 SCG2P13521 617 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 MRPL12P52815 198 aaKnown RBP11.5□□□□□ -0.57
HDLBP-209ENST00000422933 NAPAP54920 295 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 SNAP25P60880 206 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 FAM177A1Q8N128 213 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-209ENST00000422933 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 BICD2Q8TD16 824 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 PHKBQ93100 1093 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 DDX11Q96FC9 970 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
HDLBP-209ENST00000422933 ACAD9Q9H845 621 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 BRMS1Q9HCU9 246 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-209ENST00000422933 BTBD7Q9P203 1132 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 ORC3Q9UBD5 711 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-209ENST00000422933 CNTNAP5Q8WYK1 1306 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 STK36Q9NRP7 1315 aa11.5□□□□□ -0.57
HDLBP-209ENST00000422933 CYTH3O43739 400 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 ERCC3P19447 782 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 GNA11P29992 359 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 NTRK3Q16288 839 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 PFKFB3Q16875 520 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-209ENST00000422933 MCTP2Q6DN12 878 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 MTMR8Q96EF0 704 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 AGBL1Q96MI9 1066 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 MMP19Q99542 508 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 EHMT1Q9H9B1 1298 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 C6orf50Q9HD87 102 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 SH3GLB2Q9NR46 395 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 RNF146Q9NTX7 359 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 MAP3K20Q9NYL2 800 aaKnown RBP11.49□□□□□ -0.57
HDLBP-209ENST00000422933 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-209ENST00000422933 PFASO15067 1338 aa11.49□□□□□ -0.57
HDLBP-209ENST00000422933 PTPDC1A2A3K4 754 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 LARGE1O95461 756 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
HDLBP-209ENST00000422933 PDCP20941 246 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 CALML3P27482 149 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 PSMC4P43686 418 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 SOX10P56693 466 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 NLRP5P59047 1200 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 LACTBP83111 547 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-209ENST00000422933 GNL2Q13823 731 aaKnown RBP11.48□□□□□ -0.57
HDLBP-209ENST00000422933 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
HDLBP-209ENST00000422933 Q3C1V9 767 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 NSMFQ6X4W1 530 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 INTS4Q96HW7 963 aaKnown RBP11.48□□□□□ -0.57
HDLBP-209ENST00000422933 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 ADGRA2Q96PE1 1338 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 A0A0G2JMZ2 1700 aa11.48□□□□□ -0.57
HDLBP-209ENST00000422933 MGAMO43451 1857 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 ZNF536O15090 1300 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 hCG_1642624A0A1W2PR95 340 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-209ENST00000422933 CNMDO75829 334 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 PRMT2P55345 433 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 FUT2Q10981 343 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 GALNT17Q6IS24 598 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 RNF207Q6ZRF8 634 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 ABRAQ8N0Z2 381 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 RGS22Q8NE09 1264 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 NSUN7Q8NE18 718 aaKnown RBP11.47□□□□□ -0.57
HDLBP-209ENST00000422933 SMARCC2Q8TAQ2 1214 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 SOCS4Q8WXH5 440 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 ALG1Q9BT22 464 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 PSTPIP2Q9H939 334 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 EFCC1Q9HA90 598 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 BARHL2Q9NY43 387 aa11.47□□□□□ -0.57
HDLBP-209ENST00000422933 ADD3Q9UEY8 706 aaKnown RBP11.47□□□□□ -0.57
HDLBP-209ENST00000422933 ZNFX1Q9P2E3 1918 aaKnown RBP11.47□□□□□ -0.57
HDLBP-209ENST00000422933 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 H3BQV1 296 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 POTEB2H3BUK9 544 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
HDLBP-209ENST00000422933 CFBP00751 764 aa11.46□□□□□ -0.57
HDLBP-209ENST00000422933 RGS2P41220 211 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms