RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 RAD50Q92878 1312 aa29.94■■■□□ 2.38
SMDT1-202ENST00000422252 MOXD2PA6NHM9 499 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 ACLYP53396 1101 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 LRIT3Q3SXY7 679 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 GPATCH4Q5T3I0 446 aaKnown RBP29.93■■■□□ 2.38
SMDT1-202ENST00000422252 CCSAPQ6IQ19 270 aaPredicted RBP29.93■■■□□ 2.38
SMDT1-202ENST00000422252 ZSCAN10Q96SZ4 725 aaPredicted RBP29.93■■■□□ 2.38
SMDT1-202ENST00000422252 KRT23Q9C075 422 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 SPC25Q9HBM1 224 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 PDLIM7Q9NR12 457 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 PNMA2Q9UL42 364 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 ASTN1O14525 1302 aa29.93■■■□□ 2.38
SMDT1-202ENST00000422252 MYADML2A6NDP7 307 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 CST5P28325 142 aaPredicted RBP29.92■■■□□ 2.38
SMDT1-202ENST00000422252 TLE2Q04725 743 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 KCNA10Q16322 511 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 PNMA1Q8ND90 353 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 NUP133Q8WUM0 1156 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 ANKS1AQ92625 1134 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 UPF3AQ9H1J1 476 aaKnown RBP29.92■■■□□ 2.38
SMDT1-202ENST00000422252 KAT14Q9H8E8 782 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 CNNM2Q9H8M5 875 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 ZSWIM5Q9P217 1185 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 LAMA3Q16787 3333 aa29.92■■■□□ 2.38
SMDT1-202ENST00000422252 C6orf222P0C671 652 aaPredicted RBP29.91■■■□□ 2.38
SMDT1-202ENST00000422252 GJA9P57773 515 aa29.91■■■□□ 2.38
SMDT1-202ENST00000422252 RUFY2Q8WXA3 655 aa29.91■■■□□ 2.38
SMDT1-202ENST00000422252 STARD7Q9NQZ5 370 aa29.91■■■□□ 2.38
SMDT1-202ENST00000422252 NFIBO00712 420 aa29.9■■■□□ 2.38
SMDT1-202ENST00000422252 GOLGA8HP0CJ92 632 aa29.9■■■□□ 2.38
SMDT1-202ENST00000422252 BAATQ14032 418 aaPredicted RBP29.9■■■□□ 2.38
SMDT1-202ENST00000422252 ENAHQ8N8S7 591 aaPredicted RBP29.9■■■□□ 2.38
SMDT1-202ENST00000422252 PCSK9Q8NBP7 692 aaKnown RBP29.9■■■□□ 2.38
SMDT1-202ENST00000422252 CHMLP26374 656 aa29.89■■■□□ 2.38
SMDT1-202ENST00000422252 TNFAIP2Q03169 654 aa29.89■■■□□ 2.38
SMDT1-202ENST00000422252 SH3RF1Q7Z6J0 888 aa29.89■■■□□ 2.38
SMDT1-202ENST00000422252 PURBQ96QR8 312 aaKnown RBP29.89■■■□□ 2.38
SMDT1-202ENST00000422252 DDX49Q9Y6V7 483 aaKnown RBP29.89■■■□□ 2.38
SMDT1-202ENST00000422252 TNKSO95271 1327 aa29.89■■■□□ 2.38
SMDT1-202ENST00000422252 WDR19Q8NEZ3 1342 aa29.89■■■□□ 2.38
SMDT1-202ENST00000422252 LTBP2Q14767 1821 aa29.89■■■□□ 2.38
SMDT1-202ENST00000422252 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.88■■■□□ 2.37
SMDT1-202ENST00000422252 PTPDC1A2A3K4 754 aa29.88■■■□□ 2.37
SMDT1-202ENST00000422252 TRIM43BA6NCK2 446 aa29.88■■■□□ 2.37
SMDT1-202ENST00000422252 IRX5P78411 483 aaPredicted RBP29.88■■■□□ 2.37
SMDT1-202ENST00000422252 CLEC4DQ8WXI8 215 aa29.88■■■□□ 2.37
SMDT1-202ENST00000422252 TRIM43Q96BQ3 446 aaPredicted RBP29.88■■■□□ 2.37
SMDT1-202ENST00000422252 ADD3Q9UEY8 706 aaKnown RBP29.88■■■□□ 2.37
SMDT1-202ENST00000422252 LCTP09848 1927 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 PQBP1O60828 265 aaKnown RBP29.87■■■□□ 2.37
SMDT1-202ENST00000422252 ASGR1P07306 291 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 CLTBP09497 229 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 NOL8Q76FK4 1167 aaKnown RBP29.87■■■□□ 2.37
SMDT1-202ENST00000422252 MORC4Q8TE76 937 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 GLT1D1Q96MS3 346 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 UBAC1Q9BSL1 405 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 UBA5Q9GZZ9 404 aa29.87■■■□□ 2.37
SMDT1-202ENST00000422252 LRRC37A2A6NM11 1700 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 NKX3-2P78367 333 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 ASPRV1Q53RT3 343 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 GNASQ5JWF2 1037 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 GPR153Q6NV75 609 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 EEPD1Q7L9B9 569 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 FBXO16Q8IX29 292 aaPredicted RBP29.86■■■□□ 2.37
SMDT1-202ENST00000422252 BADQ92934 168 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 CPVLQ9H3G5 476 aa29.86■■■□□ 2.37
SMDT1-202ENST00000422252 GNEQ9Y223 722 aaKnown RBP29.86■■■□□ 2.37
SMDT1-202ENST00000422252 LOC102724159A0A0B4J2E5 919 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 ALDH5A1P51649 535 aaPredicted RBP29.85■■■□□ 2.37
SMDT1-202ENST00000422252 PWP2Q15269 919 aaKnown RBP29.85■■■□□ 2.37
SMDT1-202ENST00000422252 TAPT1Q6NXT6 567 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 RNF207Q6ZRF8 634 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 ANKRD33Q7Z3H0 272 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 TOX2Q96NM4 488 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 VTA1Q9NP79 307 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 PDGFCQ9NRA1 345 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 ELP1O95163 1332 aa29.85■■■□□ 2.37
SMDT1-202ENST00000422252 CTAGE5O15320 804 aa29.84■■■□□ 2.37
SMDT1-202ENST00000422252 SMPD1P17405 629 aa29.84■■■□□ 2.37
SMDT1-202ENST00000422252 CALML3P27482 149 aa29.84■■■□□ 2.37
SMDT1-202ENST00000422252 PTH1RQ03431 593 aa29.84■■■□□ 2.37
SMDT1-202ENST00000422252 IQSEC1Q6DN90 963 aa29.84■■■□□ 2.37
SMDT1-202ENST00000422252 SLC30A10Q6XR72 485 aa29.84■■■□□ 2.37
SMDT1-202ENST00000422252 USH1GQ495M9 461 aa29.83■■■□□ 2.37
SMDT1-202ENST00000422252 IFIT1BQ5T764 474 aaKnown RBP29.83■■■□□ 2.37
SMDT1-202ENST00000422252 TLK2Q86UE8 772 aa29.83■■■□□ 2.37
SMDT1-202ENST00000422252 VTI1AQ96AJ9 217 aa29.83■■■□□ 2.37
SMDT1-202ENST00000422252 U3KPZ7 1027 aaPredicted RBP29.83■■■□□ 2.37
SMDT1-202ENST00000422252 DCDC2CA8MYV0 355 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 KIAA0355O15063 1070 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 PARP1P09874 1014 aaKnown RBP29.82■■■□□ 2.36
SMDT1-202ENST00000422252 RPS6P62753 249 aaKnown RBP29.82■■■□□ 2.36
SMDT1-202ENST00000422252 BEX3Q00994 111 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 TRDNQ13061 729 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 CDC37Q16543 378 aaPredicted RBP29.82■■■□□ 2.36
SMDT1-202ENST00000422252 ADGRF4Q8IZF3 695 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 AP5M1Q9H0R1 490 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 TMEM39AQ9NV64 488 aa29.82■■■□□ 2.36
SMDT1-202ENST00000422252 MROH7Q68CQ1 1323 aa29.81■■■□□ 2.36
SMDT1-202ENST00000422252 SGSM2O43147 1006 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms