RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ANKS1AQ92625 1134 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 ESR2Q92731 530 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
SSBP3-206ENST00000420121 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 RNF41Q9H4P4 317 aaPredicted RBP13□□□□□ -0.33
SSBP3-206ENST00000420121 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 CYP39A1Q9NYL5 469 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 ZHX1Q9UKY1 873 aaPredicted RBP13□□□□□ -0.33
SSBP3-206ENST00000420121 FAM184BQ9ULE4 1060 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 ATP11BQ9Y2G3 1177 aa13□□□□□ -0.33
SSBP3-206ENST00000420121 B4E1Z4 1266 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 KDM4AO75164 1064 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 DUSP11O75319 330 aaKnown RBP12.99□□□□□ -0.33
SSBP3-206ENST00000420121 CST5P28325 142 aaPredicted RBP12.99□□□□□ -0.33
SSBP3-206ENST00000420121 CCDC144BQ3MJ40 725 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 LRIT3Q3SXY7 679 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 RNF180Q86T96 592 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 DGKHQ86XP1 1220 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 TDHQ8IZJ6 230 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 TSEN34Q9BSV6 310 aaKnown RBP12.99□□□□□ -0.33
SSBP3-206ENST00000420121 UBE2OQ9C0C9 1292 aaKnown RBP12.99□□□□□ -0.33
SSBP3-206ENST00000420121 UPF3AQ9H1J1 476 aaKnown RBP12.99□□□□□ -0.33
SSBP3-206ENST00000420121 CCPG1Q9ULG6 757 aa12.99□□□□□ -0.33
SSBP3-206ENST00000420121 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-206ENST00000420121 TRIM43BA6NCK2 446 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 NFIBO00712 420 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 ACLYP53396 1101 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 GJA9P57773 515 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 NKX3-2P78367 333 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 TLE2Q04725 743 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 ENAHQ8N8S7 591 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-206ENST00000420121 MORC4Q8TE76 937 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 CLEC4DQ8WXI8 215 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 TRIM43Q96BQ3 446 aaPredicted RBP12.98□□□□□ -0.33
SSBP3-206ENST00000420121 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
SSBP3-206ENST00000420121 RAD50Q92878 1312 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 COL6A3P12111 3177 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 PTGS1P23219 599 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 ITGB8P26012 769 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 CHMLP26374 656 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 NT5C2P49902 561 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 KCNA10Q16322 511 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 TMEM63BQ5T3F8 832 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 TAPT1Q6NXT6 567 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
SSBP3-206ENST00000420121 GNEQ9Y223 722 aaKnown RBP12.97□□□□□ -0.33
SSBP3-206ENST00000420121 KIAA1217Q5T5P2 1943 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 WDR19Q8NEZ3 1342 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 ASB14A6NK59 587 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 PTH1RQ03431 593 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-206ENST00000420121 SEC23AQ15436 765 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 IMMTQ16891 758 aaKnown RBP12.96□□□□□ -0.33
SSBP3-206ENST00000420121 GPATCH4Q5T3I0 446 aaKnown RBP12.96□□□□□ -0.33
SSBP3-206ENST00000420121 NSMFQ6X4W1 530 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 SLC30A10Q6XR72 485 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
SSBP3-206ENST00000420121 PDGFCQ9NRA1 345 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 TAF6LQ9Y6J9 622 aa12.96□□□□□ -0.33
SSBP3-206ENST00000420121 TNKSO95271 1327 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 ASGR1P07306 291 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 CYP21A2P08686 494 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 C6orf222P0C671 652 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-206ENST00000420121 SMPD1P17405 629 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 CDK7P50613 346 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 ALDH5A1P51649 535 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-206ENST00000420121 ANKRD33Q7Z3H0 272 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 FBXO16Q8IX29 292 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-206ENST00000420121 BADQ92934 168 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 PRDM5Q9NQX1 630 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-206ENST00000420121 CTNNA3Q9UI47 895 aa12.95□□□□□ -0.34
SSBP3-206ENST00000420121 BAZ2BQ9UIF8 2168 aaKnown RBP12.94□□□□□ -0.34
SSBP3-206ENST00000420121 ELP1O95163 1332 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 KIAA0355O15063 1070 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 SGSM2O43147 1006 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 CLTBP09497 229 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 BEX3Q00994 111 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 LBHD1Q9BQE6 289 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-206ENST00000420121 KRT23Q9C075 422 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 STARD7Q9NQZ5 370 aa12.94□□□□□ -0.34
SSBP3-206ENST00000420121 PQBP1O60828 265 aaKnown RBP12.93□□□□□ -0.34
SSBP3-206ENST00000420121 EDNRBP24530 442 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 EPHB4P54760 987 aa12.93□□□□□ -0.34
SSBP3-206ENST00000420121 RPS6P62753 249 aaKnown RBP12.93□□□□□ -0.34
SSBP3-206ENST00000420121 SLC35G1Q2M3R5 365 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 500 ms