RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 CYTH3O43739 400 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 ABL1P00519 1130 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 CASP14P31944 242 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 APTXQ7Z2E3 356 aaKnown RBP17.24■□□□□ 0.35
SEC24D-202ENST00000419654 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 TNFRSF25Q93038 417 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 FER1L6Q2WGJ9 1857 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 A0A1B0GTH6 734 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 DDTLA6NHG4 134 aaPredicted RBP17.24■□□□□ 0.35
SEC24D-202ENST00000419654 AKR1B15C9JRZ8 316 aaPredicted RBP17.24■□□□□ 0.35
SEC24D-202ENST00000419654 CCP110O43303 1012 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 RAD17O75943 681 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 TCP10Q12799 353 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
SEC24D-202ENST00000419654 PRMT6Q96LA8 375 aaPredicted RBP17.24■□□□□ 0.35
SEC24D-202ENST00000419654 SH3GLB2Q9NR46 395 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 GDAQ9Y2T3 454 aa17.24■□□□□ 0.35
SEC24D-202ENST00000419654 STX10O60499 249 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 SPATA1Q5VX52 437 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 GOLGA8HP0CJ92 632 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 H2AFXP16104 143 aaPredicted RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 RASSF8Q8NHQ8 419 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 KLRF2D3W0D1 207 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 RNF225M0QZC1 329 aaPredicted RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 ENTPD3O75355 529 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 PARP1P09874 1014 aaKnown RBP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 SMARCA1P28370 1054 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEC24D-202ENST00000419654 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
SEC24D-202ENST00000419654 TADA3O75528 432 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 TYW1BQ6NUM6 668 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 SH3RF1Q7Z6J0 888 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 ACRBPQ8NEB7 543 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
SEC24D-202ENST00000419654 TRIM49BA6NDI0 452 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 TTLL1O95922 423 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 ERCC5P28715 1186 aaPredicted RBP17.22■□□□□ 0.35
SEC24D-202ENST00000419654 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
SEC24D-202ENST00000419654 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
SEC24D-202ENST00000419654 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
SEC24D-202ENST00000419654 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
SEC24D-202ENST00000419654 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
SEC24D-202ENST00000419654 SPDYE2BA6NHP3 402 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 SPDYE6P0CI01 402 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 PDHBP11177 359 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
SEC24D-202ENST00000419654 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
SEC24D-202ENST00000419654 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 N4BP3O15049 544 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 PPP2R3AQ06190 1150 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
SEC24D-202ENST00000419654 FHOD1Q9Y613 1164 aa17.21■□□□□ 0.35
SEC24D-202ENST00000419654 ERICH4A6NGS2 130 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 USP17L5A8MUK1 530 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 KRT31Q15323 416 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 CLEC10AQ8IUN9 316 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 POLR3GO15318 223 aaPredicted RBP17.2■□□□□ 0.34
SEC24D-202ENST00000419654 GYPCP04921 128 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 CALML3P27482 149 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 IQUBQ8NA54 791 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 HDAC9Q9UKV0 1011 aa17.2■□□□□ 0.34
SEC24D-202ENST00000419654 MYO1BO43795 1136 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 PNMA6AP0CW24 399 aaPredicted RBP17.19■□□□□ 0.34
SEC24D-202ENST00000419654 E2F4Q16254 413 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 INF2Q27J81 1249 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 WWC2Q6AWC2 1192 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
SEC24D-202ENST00000419654 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
SEC24D-202ENST00000419654 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 KIFC2Q96AC6 838 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 GSDMAQ96QA5 445 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 BARHL2Q9NY43 387 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
SEC24D-202ENST00000419654 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
SEC24D-202ENST00000419654 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 TAOK3Q9H2K8 898 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
SEC24D-202ENST00000419654 CCDC175P0C221 793 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 ASPRV1Q53RT3 343 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms