RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 IFIH1Q9BYX4 1025 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 SARS2Q9NP81 518 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 GDF11O95390 407 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 MYL1P05976 194 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 CTNNA1P35221 906 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 ASPHQ12797 758 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 PTPN21Q16825 1174 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 GJA10Q969M2 543 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 RPS6KB1P23443 525 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 XRCC5P13010 732 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 HLA-DPA1P20036 260 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 BCAMP50895 628 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 TFAMQ00059 246 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 TNNI3KQ59H18 835 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 DBNDD1Q9H9R9 158 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 DDX25Q9UHL0 483 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 FPGT-TNNI3KV9GXZ4 949 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 H3BRJ5 948 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 MYBP10242 640 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 POLR2FP61218 127 aaKnown RBP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 ELF2Q15723 593 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 TRIM59Q8IWR1 403 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHANK3-202ENST00000414786 CHURC1Q8WUH1 139 aa20.18■□□□□ 0.82
SHANK3-202ENST00000414786 RAD17O75943 681 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 SRGAP2CP0DJJ0 459 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 MESDQ14696 234 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 RNF219Q5W0B1 726 aaPredicted RBP20.17■□□□□ 0.82
SHANK3-202ENST00000414786 HAUS1Q96CS2 278 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.17■□□□□ 0.82
SHANK3-202ENST00000414786 PDZD4Q76G19 769 aaPredicted RBP20.17■□□□□ 0.82
SHANK3-202ENST00000414786 DAAM1Q9Y4D1 1078 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 OSBPP22059 807 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 ANXA13P27216 316 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 GARSP41250 739 aaKnown RBP20.17■□□□□ 0.82
SHANK3-202ENST00000414786 B4GALNT4Q76KP1 1039 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 SYCE1Q8N0S2 351 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 PCDHB15Q9Y5E8 787 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 CFLARO15519 480 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 STAT1P42224 750 aa20.17■□□□□ 0.82
SHANK3-202ENST00000414786 GCP02774 474 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 THOC5Q13769 683 aaKnown RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 POSTNQ15063 836 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 CCDC85BQ15834 202 aaPredicted RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 G2E3Q7L622 706 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 KRT25Q7Z3Z0 450 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 FAM178BQ8IXR5 827 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 SLC8A2Q9UPR5 921 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 ORC6Q9Y5N6 252 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 TRIP13Q15645 432 aaPredicted RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 NEUROG2Q9H2A3 272 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 N4BP1O75113 896 aaKnown RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 SNX19Q92543 992 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 ZNF668Q96K58 619 aaPredicted RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 DPYSL4O14531 572 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 CAPRIN1Q14444 709 aaKnown RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 FASTKD5Q7L8L6 764 aaKnown RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 LINS1Q8NG48 757 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 ZSCAN32Q9NX65 697 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 SERTAD1Q9UHV2 236 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 RASSF2P50749 326 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 CFAP221Q4G0U5 840 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 PIP4K2CQ8TBX8 421 aa20.16■□□□□ 0.82
SHANK3-202ENST00000414786 ANGEL1Q9UNK9 670 aaKnown RBP20.16■□□□□ 0.82
SHANK3-202ENST00000414786 RNF8O76064 485 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 ZFYVE19Q96K21 471 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 CCDC138Q96M89 665 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 PCDHA12Q9UN75 941 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
SHANK3-202ENST00000414786 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 TBC1D32Q96NH3 1257 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 TEKT3Q9BXF9 490 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 CDK13Q14004 1512 aaKnown RBP20.15■□□□□ 0.82
SHANK3-202ENST00000414786 MEIS1O00470 390 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 ZNF202O95125 648 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 PMLP29590 882 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 EDC3Q96F86 508 aaKnown RBP20.15■□□□□ 0.82
SHANK3-202ENST00000414786 ARHGDIAP52565 204 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 FBXO11Q86XK2 927 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 ANKRD36BP1Q96IX9 119 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 CLCA2Q9UQC9 943 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 ATF2P15336 505 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 SLC16A2P36021 539 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 FAM160B1Q5W0V3 765 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 DESI2Q9BSY9 194 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 SAMSN1Q9NSI8 373 aaKnown RBP20.15■□□□□ 0.82
SHANK3-202ENST00000414786 PGBD3Q8N328 593 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 BBS5Q8N3I7 341 aa20.15■□□□□ 0.82
SHANK3-202ENST00000414786 FAF1Q9UNN5 650 aaPredicted RBP20.15■□□□□ 0.82
SHANK3-202ENST00000414786 IFNAR2P48551 515 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 USP17L12C9JPN9 530 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 USP17L21D6R901 530 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 LRRN2O75325 713 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms