RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CCDC136Q96JN2 1154 aa30.79■■■□□ 2.52
VEGFA-207ENST00000413642 KATNBL1Q9H079 304 aa30.79■■■□□ 2.52
VEGFA-207ENST00000413642 RBM27Q9P2N5 1060 aaKnown RBP30.79■■■□□ 2.52
VEGFA-207ENST00000413642 FAM184BQ9ULE4 1060 aa30.79■■■□□ 2.52
VEGFA-207ENST00000413642 IRX5P78411 483 aaPredicted RBP30.78■■■□□ 2.52
VEGFA-207ENST00000413642 KIAA1211Q6ZU35 1233 aa30.78■■■□□ 2.52
VEGFA-207ENST00000413642 ADGRF4Q8IZF3 695 aa30.78■■■□□ 2.52
VEGFA-207ENST00000413642 STAG2Q8N3U4 1231 aa30.78■■■□□ 2.52
VEGFA-207ENST00000413642 IFIT3O14879 490 aaKnown RBP30.77■■■□□ 2.52
VEGFA-207ENST00000413642 PARP1P09874 1014 aaKnown RBP30.77■■■□□ 2.52
VEGFA-207ENST00000413642 CCDC144BQ3MJ40 725 aa30.77■■■□□ 2.52
VEGFA-207ENST00000413642 USH1GQ495M9 461 aa30.77■■■□□ 2.52
VEGFA-207ENST00000413642 ASPRV1Q53RT3 343 aa30.77■■■□□ 2.52
VEGFA-207ENST00000413642 RALYLQ86SE5 291 aaKnown RBP30.77■■■□□ 2.52
VEGFA-207ENST00000413642 NCOA7Q8NI08 942 aa30.77■■■□□ 2.52
VEGFA-207ENST00000413642 ABHD16BQ9H3Z7 469 aa30.77■■■□□ 2.52
VEGFA-207ENST00000413642 VAT1LQ9HCJ6 419 aa30.77■■■□□ 2.52
VEGFA-207ENST00000413642 ADAMTS4O75173 837 aa30.76■■■□□ 2.51
VEGFA-207ENST00000413642 ANTXR2P58335 489 aa30.76■■■□□ 2.51
VEGFA-207ENST00000413642 CDC37Q16543 378 aaPredicted RBP30.76■■■□□ 2.51
VEGFA-207ENST00000413642 SLC30A10Q6XR72 485 aa30.76■■■□□ 2.51
VEGFA-207ENST00000413642 PRO3102Q9H379 93 aa30.76■■■□□ 2.51
VEGFA-207ENST00000413642 WDR19Q8NEZ3 1342 aa30.75■■■□□ 2.51
VEGFA-207ENST00000413642 PTPDC1A2A3K4 754 aa30.75■■■□□ 2.51
VEGFA-207ENST00000413642 COL9A3Q14050 684 aaPredicted RBP30.75■■■□□ 2.51
VEGFA-207ENST00000413642 SYNRGQ9UMZ2 1314 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 MYADML2A6NDP7 307 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 ASB14A6NK59 587 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 CALML3P27482 149 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 SLC39A5Q6ZMH5 540 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 EEPD1Q7L9B9 569 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 MB21D2Q8IYB1 491 aaPredicted RBP30.74■■■□□ 2.51
VEGFA-207ENST00000413642 JMJD4Q9H9V9 463 aa30.74■■■□□ 2.51
VEGFA-207ENST00000413642 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-207ENST00000413642 DHX16O60231 1041 aaKnown RBP30.73■■■□□ 2.51
VEGFA-207ENST00000413642 PTGS1P23219 599 aa30.73■■■□□ 2.51
VEGFA-207ENST00000413642 RTP1P59025 263 aa30.73■■■□□ 2.51
VEGFA-207ENST00000413642 RNF180Q86T96 592 aa30.73■■■□□ 2.51
VEGFA-207ENST00000413642 ANO2Q9NQ90 1003 aa30.73■■■□□ 2.51
VEGFA-207ENST00000413642 GPHNQ9NQX3 736 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-207ENST00000413642 PHF24Q9UPV7 400 aa30.73■■■□□ 2.51
VEGFA-207ENST00000413642 CEP290O15078 2479 aa30.73■■■□□ 2.51
VEGFA-207ENST00000413642 SLC27A2O14975 620 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 QRICH1Q2TAL8 776 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 RNF207Q6ZRF8 634 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 PDGFCQ9NRA1 345 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 MAD2L2Q9UI95 211 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 ATP11BQ9Y2G3 1177 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 SMCHD1A6NHR9 2005 aa30.72■■■□□ 2.51
VEGFA-207ENST00000413642 DUSP11O75319 330 aaKnown RBP30.71■■■□□ 2.51
VEGFA-207ENST00000413642 WTAPQ15007 396 aa30.71■■■□□ 2.51
VEGFA-207ENST00000413642 SLC35G1Q2M3R5 365 aa30.71■■■□□ 2.51
VEGFA-207ENST00000413642 FBXO16Q8IX29 292 aaPredicted RBP30.71■■■□□ 2.51
VEGFA-207ENST00000413642 TBC1D5Q92609 795 aa30.71■■■□□ 2.51
VEGFA-207ENST00000413642 PNMA2Q9UL42 364 aa30.71■■■□□ 2.51
VEGFA-207ENST00000413642 KLRF2D3W0D1 207 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 ALDH5A1P51649 535 aaPredicted RBP30.7■■■□□ 2.51
VEGFA-207ENST00000413642 RPS6P62753 249 aaKnown RBP30.7■■■□□ 2.51
VEGFA-207ENST00000413642 NECTIN1Q15223 517 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 TMEM67Q5HYA8 995 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 TMEM63BQ5T3F8 832 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 CREB3L3Q68CJ9 461 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 KLHDC9Q8NEP7 349 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 IGDCC4Q8TDY8 1250 aa30.7■■■□□ 2.51
VEGFA-207ENST00000413642 ERICH2A1L162 156 aa30.69■■■□□ 2.5
VEGFA-207ENST00000413642 PALM3A6NDB9 673 aaPredicted RBP30.69■■■□□ 2.5
VEGFA-207ENST00000413642 SLC34A2O95436 690 aa30.69■■■□□ 2.5
VEGFA-207ENST00000413642 TRIM60Q495X7 471 aa30.69■■■□□ 2.5
VEGFA-207ENST00000413642 GDF15Q99988 308 aa30.69■■■□□ 2.5
VEGFA-207ENST00000413642 MAGEA10P43363 369 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-207ENST00000413642 TNFAIP2Q03169 654 aa30.68■■■□□ 2.5
VEGFA-207ENST00000413642 GRM4Q14833 912 aa30.68■■■□□ 2.5
VEGFA-207ENST00000413642 CCSAPQ6IQ19 270 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-207ENST00000413642 TAPT1Q6NXT6 567 aa30.68■■■□□ 2.5
VEGFA-207ENST00000413642 MORC4Q8TE76 937 aa30.68■■■□□ 2.5
VEGFA-207ENST00000413642 A0A1W2PQ45 241 aaPredicted RBP30.67■■■□□ 2.5
VEGFA-207ENST00000413642 A0A1W2PQY0 241 aa30.67■■■□□ 2.5
VEGFA-207ENST00000413642 C6orf222P0C671 652 aaPredicted RBP30.67■■■□□ 2.5
VEGFA-207ENST00000413642 FXR1P51114 621 aaKnown RBP eCLIP30.67■■■□□ 2.5
VEGFA-207ENST00000413642 ACLYP53396 1101 aa30.67■■■□□ 2.5
VEGFA-207ENST00000413642 SNX17Q15036 470 aa30.67■■■□□ 2.5
VEGFA-207ENST00000413642 KCNA10Q16322 511 aa30.67■■■□□ 2.5
VEGFA-207ENST00000413642 NOL8Q76FK4 1167 aaKnown RBP30.67■■■□□ 2.5
VEGFA-207ENST00000413642 FBXO11Q86XK2 927 aa30.67■■■□□ 2.5
VEGFA-207ENST00000413642 ADD3Q9UEY8 706 aaKnown RBP30.67■■■□□ 2.5
VEGFA-207ENST00000413642 CTAGE5O15320 804 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 PRC1O43663 620 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 PPP1R11O60927 126 aaPredicted RBP30.66■■■□□ 2.5
VEGFA-207ENST00000413642 CDC45O75419 566 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 SMPD1P17405 629 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 GJA9P57773 515 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 TROAPQ12815 778 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 SART3Q15020 963 aaKnown RBP30.66■■■□□ 2.5
VEGFA-207ENST00000413642 UPF3AQ9H1J1 476 aaKnown RBP30.66■■■□□ 2.5
VEGFA-207ENST00000413642 ABCB11O95342 1321 aa30.66■■■□□ 2.5
VEGFA-207ENST00000413642 TSEN34Q9BSV6 310 aaKnown RBP30.65■■■□□ 2.5
VEGFA-207ENST00000413642 LY9Q9HBG7 655 aa30.65■■■□□ 2.5
VEGFA-207ENST00000413642 GNEQ9Y223 722 aaKnown RBP30.65■■■□□ 2.5
VEGFA-207ENST00000413642 MCM3APO60318 1980 aa30.65■■■□□ 2.5
VEGFA-207ENST00000413642 NEFLP07196 543 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms