RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CAPN11Q9UMQ6 739 aa17.83■□□□□ 0.44
HOXD3-202ENST00000410016 NDUFA10O95299 355 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 GNA11P29992 359 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 FAM193AP78312 1265 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 STIM1Q13586 685 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 CRY2Q49AN0 593 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 WDR59Q6PJI9 974 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 TEX11Q8IYF3 940 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 C7orf25Q9BPX7 421 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 MMTAG2Q9BU76 263 aaKnown RBP17.82■□□□□ 0.44
HOXD3-202ENST00000410016 FUT8Q9BYC5 575 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 ARFGAP3Q9NP61 516 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
HOXD3-202ENST00000410016 TFRCP02786 760 aaKnown RBP17.82■□□□□ 0.44
HOXD3-202ENST00000410016 STK4Q13043 487 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 NEK8Q86SG6 692 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 CERKQ8TCT0 537 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 TRIM47Q96LD4 638 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 C6orf50Q9HD87 102 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 LUC7L2Q9Y383 392 aaKnown RBP17.82■□□□□ 0.44
HOXD3-202ENST00000410016 MYH8P13535 1937 aa17.82■□□□□ 0.44
HOXD3-202ENST00000410016 NAV1Q8NEY1 1877 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 CCDC151A5D8V7 595 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 RASSF10A6NK89 507 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 UFL1O94874 794 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 SRGNP10124 158 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 JAKMIP3Q5VZ66 844 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
HOXD3-202ENST00000410016 TTYH3Q9C0H2 523 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 DNM2P50570 870 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 CSGALNACT2Q8N6G5 542 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 NOC3LQ8WTT2 800 aaKnown RBP17.81■□□□□ 0.44
HOXD3-202ENST00000410016 PIGSQ96S52 555 aa17.81■□□□□ 0.44
HOXD3-202ENST00000410016 NAPGQ99747 312 aaPredicted RBP17.81■□□□□ 0.44
HOXD3-202ENST00000410016 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 CCNE1P24864 410 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 TECP42680 631 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 AMPD2Q01433 879 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 ANKRD40Q6AI12 368 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 P2RX5Q93086 422 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 TUBGCP2Q9BSJ2 902 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 RIOX1Q9H6W3 641 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 VAT1LQ9HCJ6 419 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 RAB21Q9UL25 225 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 DDX60LQ5H9U9 1706 aaKnown RBP17.8■□□□□ 0.44
HOXD3-202ENST00000410016 USP17L5A8MUK1 530 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 GAKO14976 1311 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 PLCG2P16885 1265 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 PDE4DQ08499 809 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 BRD3Q15059 726 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 MEA1Q16626 185 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 MSANTD4Q8NCY6 345 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
HOXD3-202ENST00000410016 EEF2KMTQ96G04 330 aa17.8■□□□□ 0.44
HOXD3-202ENST00000410016 ESYT2A0FGR8 921 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 B4DLN1 442 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 EDIL3O43854 480 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 FCER1AP12319 257 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 MFSD14BQ5SR56 506 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 HNRNPLLQ8WVV9 542 aaKnown RBP17.79■□□□□ 0.44
HOXD3-202ENST00000410016 MTMR9Q96QG7 549 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 UBA5Q9GZZ9 404 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 AGPAT5Q9NUQ2 364 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 MAGEC2Q9UBF1 373 aaPredicted RBP17.79■□□□□ 0.44
HOXD3-202ENST00000410016 TRIM10Q9UDY6 481 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 LRRC4BQ9NT99 713 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
HOXD3-202ENST00000410016 POLLQ9UGP5 575 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
HOXD3-202ENST00000410016 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
HOXD3-202ENST00000410016 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 NKRFO15226 690 aaKnown RBP eCLIP17.78■□□□□ 0.44
HOXD3-202ENST00000410016 PDHBP11177 359 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 TUBB4BP68371 445 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 ORC2Q13416 577 aaPredicted RBP17.78■□□□□ 0.44
HOXD3-202ENST00000410016 WHAMMP3Q1A5X7 153 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 COBLL1Q53SF7 1204 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
HOXD3-202ENST00000410016 PNKPQ96T60 521 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 EXOC1Q9NV70 894 aa17.78■□□□□ 0.44
HOXD3-202ENST00000410016 BICDL2A1A5D9 508 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 PES1O00541 588 aaKnown RBP17.77■□□□□ 0.44
HOXD3-202ENST00000410016 MAP2K7O14733 419 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 TOM1O60784 492 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 HERVK_113P62684 666 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 ASIC1P78348 528 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 MIIPQ5JXC2 388 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 KIAA0895Q8NCT3 520 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 HAUS4Q9H6D7 363 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 TMEM260Q9NX78 707 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
HOXD3-202ENST00000410016 BEND6Q5SZJ8 279 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms