RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 USP17L10C9JJH3 530 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 GNA11P29992 359 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 RBM5P52756 815 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 ZNF658Q5TYW1 1059 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 NELFBQ8WX92 580 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 GJA10Q969M2 543 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 ZDHHC15Q96MV8 337 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 RAD21O60216 631 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 KCNJ6P48051 423 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 NCBP1Q09161 790 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 MTF1Q14872 753 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 CCDC96Q2M329 555 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 SYT10Q6XYQ8 523 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 PODNQ7Z5L7 613 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 SWAP70Q9UH65 585 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 UTRNP46939 3433 aa17.11■□□□□ 0.33
SCAMP4-202ENST00000409472 PBX1P40424 430 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 PRPHP41219 470 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 PAK1Q13153 545 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 KRT31Q15323 416 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 CABP7Q86V35 215 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 KBTBD4Q9NVX7 518 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 PAXBP1Q9Y5B6 917 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 MYH7BA7E2Y1 1941 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 ESYT2A0FGR8 921 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 HLA-DOAP06340 250 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 ADCY7P51828 1080 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 LRRN4CLQ8ND94 238 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 DESI2Q9BSY9 194 aa17.1■□□□□ 0.33
SCAMP4-202ENST00000409472 H0YIN7 160 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 TAL1P17542 331 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 TXKP42681 527 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 TNNI2P48788 182 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 REXO1L1PQ8IX06 675 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 TAB2Q9NYJ8 693 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 RWDD2AQ9UIY3 292 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 POTEMA6NI47 508 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 LAD1O00515 517 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 GDF11O95390 407 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 JAG1P78504 1218 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 RBL2Q08999 1139 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 ZNF772Q68DY9 489 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 CREBRFQ8IUR6 639 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 HPS3Q969F9 1004 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 PYM1Q9BRP8 204 aaKnown RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 ARFGEF1Q9Y6D6 1849 aa17.09■□□□□ 0.33
SCAMP4-202ENST00000409472 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 SYCP1Q15431 976 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 IRF2BP1Q8IU81 584 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 IGSF22Q8N9C0 903 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 TSPYL1Q9H0U9 437 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 VPS16Q9H269 839 aa17.08■□□□□ 0.33
SCAMP4-202ENST00000409472 C10orf71Q711Q0 1435 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 A0A0U1RQJ8 604 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 EEF2P13639 858 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 SNAP25P60880 206 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 CT47A1Q5JQC4 288 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 ADSSL1Q8N142 457 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 ATRIPQ8WXE1 791 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 EHD4Q9H223 541 aa17.08■□□□□ 0.32
SCAMP4-202ENST00000409472 SOWAHDA6NJG2 315 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 NRDCO43847 1150 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 STYK1Q6J9G0 422 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 TDRD3Q9H7E2 651 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 PPP2R2CQ9Y2T4 447 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 PNMA6FA0A0J9YX94 578 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 ARHGAP6O43182 974 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 GYPCP04921 128 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 SEPT2Q15019 361 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms