RNA–Protein interactions for RNA: ENST00000400345.7

NEDD4L-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-205ENST00000400345 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 H7C1D1 291 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 MDM2Q00987 491 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 USP17L2Q6R6M4 530 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 SPAG5Q96R06 1193 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 FBXO3Q9UK99 471 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 EIF3CLB5ME19 914 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 ATP8B1O43520 1251 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 TBX2Q13207 712 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 LLGL1Q15334 1064 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 GJA10Q969M2 543 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 CCDC51Q96ER9 411 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 TMEM60Q9H2L4 133 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 PDCLQ13371 301 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 JCADQ9P266 1359 aa16.34■□□□□ 0.21
NEDD4L-205ENST00000400345 TLDC2A0PJX2 215 aa16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 BACH1O14867 736 aa16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 MSL1Q68DK7 614 aa16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 ZSCAN29Q8IWY8 852 aaPredicted RBP16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 SELENOOQ9BVL4 669 aa16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.21
NEDD4L-205ENST00000400345 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 VAV2P52735 878 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 GUCY2DQ02846 1103 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 KSR1Q8IVT5 923 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 DNM2P50570 870 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 AMPD3Q01432 767 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 TRIM14Q14142 442 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 DCAF17Q5H9S7 520 aaPredicted RBP16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 SRLQ86TD4 932 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 FAM114A1Q8IWE2 563 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 TSG101Q99816 390 aa16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 PPANQ9NQ55 473 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-205ENST00000400345 EHHADHQ08426 723 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 TMEM266Q2M3C6 531 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 NAA35Q5VZE5 725 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 DNAAF5Q86Y56 855 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 KLRF2D3W0D1 207 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 MECOMQ03112 1051 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 OTUD6BQ8N6M0 293 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 SNX29Q8TEQ0 813 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 MS4A14Q96JA4 679 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 DISC1Q9NRI5 854 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 PPP1R1BQ9UD71 204 aaPredicted RBP16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 RGPD1P0DJD0 1748 aa16.32■□□□□ 0.2
NEDD4L-205ENST00000400345 STK36Q9NRP7 1315 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 IFFO1Q0D2I5 559 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 TRIM37O94972 964 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 STK4Q13043 487 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 LRRC47Q8N1G4 583 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 TCRBV5S4A2TA0A5A2 114 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 BICDL2A1A5D9 508 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 ADAMTS3O15072 1205 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 LDHBP07195 334 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 COA7Q96BR5 231 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 PHF20Q9BVI0 1012 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
NEDD4L-205ENST00000400345 USP8P40818 1118 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 POLR2FP61218 127 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 PKN1Q16512 942 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 HDAC7Q8WUI4 952 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 RRP36Q96EU6 259 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 CAPS2Q9BXY5 557 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 ABCC12Q96J65 1359 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 PLS1Q14651 629 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 CEP57Q86XR8 500 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 COG1Q8WTW3 980 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 KRT12Q99456 494 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 PYM1Q9BRP8 204 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 LUC7LQ9NQ29 371 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 WDR19Q8NEZ3 1342 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 CEP104O60308 925 aa16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 SARSP49591 514 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-205ENST00000400345 RBM5P52756 815 aaKnown RBP eCLIP16.3■□□□□ 0.21e-7■■■■□ 20.1
NEDD4L-205ENST00000400345 KRT79Q5XKE5 535 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms