RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
ITSN1-211ENST00000399355 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
ITSN1-211ENST00000399355 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 MEIS1O00470 390 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 PDE4DQ08499 809 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.29
ITSN1-211ENST00000399355 SH2D3AQ9BRG2 576 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
ITSN1-211ENST00000399355 GOLPH3Q9H4A6 298 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 ABHD10Q9NUJ1 306 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
ITSN1-211ENST00000399355 ARAP2Q8WZ64 1704 aa13.21□□□□□ -0.3
ITSN1-211ENST00000399355 KLRC4O43908 158 aa13.21□□□□□ -0.3
ITSN1-211ENST00000399355 GDF11O95390 407 aa13.21□□□□□ -0.3
ITSN1-211ENST00000399355 H2AFXP16104 143 aaPredicted RBP13.21□□□□□ -0.3
ITSN1-211ENST00000399355 RHBDL3P58872 404 aa13.21□□□□□ -0.3
ITSN1-211ENST00000399355 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.3
ITSN1-211ENST00000399355 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.3
ITSN1-211ENST00000399355 ADAMTSL1Q8N6G6 1762 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 GRAPQ13588 217 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 USH1GQ495M9 461 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
ITSN1-211ENST00000399355 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 ORC4O43929 436 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 SYCP1Q15431 976 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
ITSN1-211ENST00000399355 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 DDAH1O94760 285 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
ITSN1-211ENST00000399355 WDR59Q6PJI9 974 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
ITSN1-211ENST00000399355 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
ITSN1-211ENST00000399355 KIAA0895Q8NCT3 520 aa13.2□□□□□ -0.3
ITSN1-211ENST00000399355 PBX1P40424 430 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
ITSN1-211ENST00000399355 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 CYP2W1Q8TAV3 490 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 TBC1D16Q8TBP0 767 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
ITSN1-211ENST00000399355 RBM28Q9NW13 759 aaKnown RBP13.19□□□□□ -0.3
ITSN1-211ENST00000399355 MRFAP1Q9Y605 127 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 H3BQF6 201 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 STX10O60499 249 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 FGRP09769 529 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 CCDC175P0C221 793 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
ITSN1-211ENST00000399355 CABP7Q86V35 215 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 TTF2Q9UNY4 1162 aaKnown RBP13.19□□□□□ -0.3
ITSN1-211ENST00000399355 DAGLAQ9Y4D2 1042 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 M0R2N6 131 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 JAG1P78504 1218 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
ITSN1-211ENST00000399355 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
ITSN1-211ENST00000399355 NRDCO43847 1150 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
ITSN1-211ENST00000399355 POLD1P28340 1107 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 ARHGAP25P42331 645 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 FERMT2Q96AC1 680 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 ELMO3Q96BJ8 720 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 ZBTB39O15060 712 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 NCK2O43639 380 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 PROM2Q8N271 834 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 MYMKA6NI61 221 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-211ENST00000399355 KRT222Q8N1A0 295 aa13.18□□□□□ -0.3
ITSN1-211ENST00000399355 BMP2KQ9NSY1 1161 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-211ENST00000399355 SFI1A8K8P3 1242 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 ZNF263O14978 683 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 VSNL1P62760 191 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 KIF5BP33176 963 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 CYP4A11Q02928 519 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 DGKZQ13574 1117 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 GRM4Q14833 912 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 E9PMD0 336 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 PDHBP11177 359 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 FAM193AP78312 1265 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms