RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 CAPN11Q9UMQ6 739 aa20.58■□□□□ 0.88
IFFO1-204ENST00000396840 FAN1Q9Y2M0 1017 aa20.58■□□□□ 0.88
IFFO1-204ENST00000396840 LAMB1P07942 1786 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 GNPATO15228 680 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 ZNF185O15231 689 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 FAM98CQ17RN3 349 aaKnown RBP20.57■□□□□ 0.88
IFFO1-204ENST00000396840 AMIGO3Q86WK7 504 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 CCDC148Q8NFR7 591 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 CNOT6LQ96LI5 555 aaKnown RBP20.57■□□□□ 0.88
IFFO1-204ENST00000396840 EXOC1Q9NV70 894 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 MYO1AQ9UBC5 1043 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 JAKMIP2Q96AA8 810 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 THAP9Q9H5L6 903 aa20.57■□□□□ 0.88
IFFO1-204ENST00000396840 MKRN1Q9UHC7 482 aaKnown RBP20.57■□□□□ 0.88
IFFO1-204ENST00000396840 LRRIQ3A6PVS8 624 aaPredicted RBP20.56■□□□□ 0.88
IFFO1-204ENST00000396840 ZPR1O75312 459 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 TUBB2AQ13885 445 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 KCNB1Q14721 858 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 NFIXQ14938 502 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 FAM182BQ5T319 152 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 TUBB2BQ9BVA1 445 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 HAUS4Q9H6D7 363 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 SLC39A2Q9NP94 309 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 BIN2Q9UBW5 565 aaPredicted RBP20.56■□□□□ 0.88
IFFO1-204ENST00000396840 GOLGB1Q14789 3259 aaKnown RBP20.56■□□□□ 0.88
IFFO1-204ENST00000396840 SMCO2A6NFE2 343 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 RASSF10A6NK89 507 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 PLEKP08567 350 aaPredicted RBP20.56■□□□□ 0.88
IFFO1-204ENST00000396840 DNM2P50570 870 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 SLC10A5Q5PT55 438 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 KRT26Q7Z3Y9 468 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 DRC1Q96MC2 740 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 NOC4LQ9BVI4 516 aaKnown RBP20.56■□□□□ 0.88
IFFO1-204ENST00000396840 TRIM9Q9C026 710 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 UBA5Q9GZZ9 404 aa20.56■□□□□ 0.88
IFFO1-204ENST00000396840 NHEJ1Q9H9Q4 299 aaPredicted RBP20.56■□□□□ 0.88
IFFO1-204ENST00000396840 OR52Z1P0C646 297 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 TNNT3P45378 269 aaPredicted RBP20.55■□□□□ 0.88
IFFO1-204ENST00000396840 ZSCAN26Q16670 478 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 TRAPPC11Q7Z392 1133 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 GSPT2Q8IYD1 628 aaKnown RBP20.55■□□□□ 0.88
IFFO1-204ENST00000396840 SMCR8Q8TEV9 937 aaPredicted RBP20.55■□□□□ 0.88
IFFO1-204ENST00000396840 P2RX5Q93086 422 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 CCSER1Q9C0I3 900 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 TMEM260Q9NX78 707 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 SAR1BQ9Y6B6 198 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 TXKP42681 527 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 GNAQP50148 359 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 SPTY2D1Q68D10 685 aaPredicted RBP20.55■□□□□ 0.88
IFFO1-204ENST00000396840 FLT1P17948 1338 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 WNK3Q9BYP7 1800 aa20.55■□□□□ 0.88
IFFO1-204ENST00000396840 A0A1W2PQC6 194 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 EIF3JO75822 258 aaKnown RBP20.54■□□□□ 0.88
IFFO1-204ENST00000396840 SRGNP10124 158 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 RASA1P20936 1047 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 TPTE2Q6XPS3 522 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 NYXQ9GZU5 481 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 ZNHIT6Q9NWK9 470 aaKnown RBP20.54■□□□□ 0.88
IFFO1-204ENST00000396840 THRAP3Q9Y2W1 955 aaKnown RBP20.54■□□□□ 0.88
IFFO1-204ENST00000396840 DYMQ7RTS9 669 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 JADE2Q9NQC1 790 aa20.54■□□□□ 0.88
IFFO1-204ENST00000396840 COL22A1Q8NFW1 1626 aaPredicted RBP20.54■□□□□ 0.88
IFFO1-204ENST00000396840 PALM3A6NDB9 673 aaPredicted RBP20.53■□□□□ 0.88
IFFO1-204ENST00000396840 PSMD14O00487 310 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 IPO7O95373 1038 aaKnown RBP20.53■□□□□ 0.88
IFFO1-204ENST00000396840 IRX5P78411 483 aaPredicted RBP20.53■□□□□ 0.88
IFFO1-204ENST00000396840 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 UIMC1Q96RL1 719 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 CCDC88AQ3V6T2 1871 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 TM4SF1P30408 202 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.88
IFFO1-204ENST00000396840 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 PIGSQ96S52 555 aa20.53■□□□□ 0.88
IFFO1-204ENST00000396840 FAM207AQ9NSI2 230 aaPredicted RBP20.53■□□□□ 0.88
IFFO1-204ENST00000396840 SPATA31A5Q5VU36 1347 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 SPATA31A7Q8IWB4 1347 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 RREB1Q92766 1687 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 KRT86O43790 486 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 CCNE1P24864 410 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 MRPS25P82663 173 aaKnown RBP20.52■□□□□ 0.88
IFFO1-204ENST00000396840 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 PSMB7Q99436 277 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 EYA3Q99504 573 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.88
IFFO1-204ENST00000396840 BAG3O95817 575 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 CAPN2P17655 700 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 KRT83P78385 493 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 RAD51AP2Q09MP3 1159 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 HSP90B2PQ58FF3 399 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 EXOC4Q96A65 974 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 DHTKD1Q96HY7 919 aaPredicted RBP20.52■□□□□ 0.88
IFFO1-204ENST00000396840 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
IFFO1-204ENST00000396840 IDEP14735 1019 aa20.51■□□□□ 0.87
IFFO1-204ENST00000396840 CYLC1P35663 651 aaPredicted RBP20.51■□□□□ 0.87
IFFO1-204ENST00000396840 MIIPQ5JXC2 388 aa20.51■□□□□ 0.87
IFFO1-204ENST00000396840 KIAA0895Q8NCT3 520 aa20.51■□□□□ 0.87
IFFO1-204ENST00000396840 TTYH3Q9C0H2 523 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms