RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 ASTN1O14525 1302 aa22.76■■□□□ 1.23
COL11A2-204ENST00000395194 CTAGE5O15320 804 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 ORC4O43929 436 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 PLA2G6O60733 806 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 FGAP02671 866 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 SMAD3P84022 425 aaKnown RBP22.75■■□□□ 1.23
COL11A2-204ENST00000395194 TNFAIP2Q03169 654 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 NMIQ13287 307 aaPredicted RBP22.75■■□□□ 1.23
COL11A2-204ENST00000395194 TKFCQ3LXA3 575 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 ZNF589Q86UQ0 364 aaPredicted RBP22.75■■□□□ 1.23
COL11A2-204ENST00000395194 TBX21Q9UL17 535 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 ELP1O95163 1332 aa22.75■■□□□ 1.23
COL11A2-204ENST00000395194 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
COL11A2-204ENST00000395194 A0A0U1RQG5 324 aaPredicted RBP22.74■■□□□ 1.23
COL11A2-204ENST00000395194 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
COL11A2-204ENST00000395194 MCMDC2Q4G0Z9 681 aa22.74■■□□□ 1.23
COL11A2-204ENST00000395194 FBXO16Q8IX29 292 aaPredicted RBP22.74■■□□□ 1.23
COL11A2-204ENST00000395194 MYLIPQ8WY64 445 aa22.74■■□□□ 1.23
COL11A2-204ENST00000395194 PPP1R12CQ9BZL4 782 aa22.74■■□□□ 1.23
COL11A2-204ENST00000395194 PDGFCQ9NRA1 345 aa22.74■■□□□ 1.23
COL11A2-204ENST00000395194 MROH7Q68CQ1 1323 aa22.74■■□□□ 1.23
COL11A2-204ENST00000395194 ASB14A6NK59 587 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 ARVCFO00192 962 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 TIMP1P01033 207 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 HDAC1Q13547 482 aaPredicted RBP22.73■■□□□ 1.23
COL11A2-204ENST00000395194 ALX1Q15699 326 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 TLK2Q86UE8 772 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 DCAF4Q8WV16 495 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 RILPL2Q969X0 211 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 GPCPD1Q9NPB8 672 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 CYP39A1Q9NYL5 469 aa22.73■■□□□ 1.23
COL11A2-204ENST00000395194 VCANP13611 3396 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 HSPD1P10809 573 aaKnown RBP22.72■■□□□ 1.23
COL11A2-204ENST00000395194 CDK7P50613 346 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 TMEM63BQ5T3F8 832 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 SYDE2Q5VT97 1194 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 B4GALNT3Q6L9W6 998 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 CXCL17Q6UXB2 119 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.72■■□□□ 1.23
COL11A2-204ENST00000395194 TMEM47Q9BQJ4 181 aa22.72■■□□□ 1.23
COL11A2-204ENST00000395194 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.72■■□□□ 1.23
COL11A2-204ENST00000395194 ICAM1P05362 532 aa22.71■■□□□ 1.23
COL11A2-204ENST00000395194 FGRP09769 529 aa22.71■■□□□ 1.23
COL11A2-204ENST00000395194 SMPD1P17405 629 aa22.71■■□□□ 1.23
COL11A2-204ENST00000395194 NOVP48745 357 aa22.71■■□□□ 1.23
COL11A2-204ENST00000395194 FAM126BQ8IXS8 530 aa22.71■■□□□ 1.23
COL11A2-204ENST00000395194 YTHDC1Q96MU7 727 aaKnown RBP22.71■■□□□ 1.23
COL11A2-204ENST00000395194 RANBP17Q9H2T7 1088 aaKnown RBP22.71■■□□□ 1.23
COL11A2-204ENST00000395194 GNEQ9Y223 722 aaKnown RBP22.71■■□□□ 1.23
COL11A2-204ENST00000395194 NFIBO00712 420 aa22.7■■□□□ 1.22
COL11A2-204ENST00000395194 DYNC1LI2O43237 492 aaPredicted RBP22.7■■□□□ 1.22
COL11A2-204ENST00000395194 TOP1P11387 765 aaKnown RBP22.7■■□□□ 1.22
COL11A2-204ENST00000395194 FSCN1Q16658 493 aaKnown RBP22.7■■□□□ 1.22
COL11A2-204ENST00000395194 MFSD5Q6N075 450 aa22.7■■□□□ 1.22
COL11A2-204ENST00000395194 AP5M1Q9H0R1 490 aa22.7■■□□□ 1.22
COL11A2-204ENST00000395194 CCDC171Q6TFL3 1326 aa22.7■■□□□ 1.22
COL11A2-204ENST00000395194 LAMA4Q16363 1823 aa22.69■■□□□ 1.22
COL11A2-204ENST00000395194 ACRP10323 421 aa22.69■■□□□ 1.22
COL11A2-204ENST00000395194 CSF2RAP15509 400 aa22.69■■□□□ 1.22
COL11A2-204ENST00000395194 BAATQ14032 418 aaPredicted RBP22.69■■□□□ 1.22
COL11A2-204ENST00000395194 TBC1D10CQ8IV04 446 aa22.69■■□□□ 1.22
COL11A2-204ENST00000395194 MAFAQ8NHW3 353 aaPredicted RBP22.69■■□□□ 1.22
COL11A2-204ENST00000395194 GBF1Q92538 1859 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 PTPDC1A2A3K4 754 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 TLR3O15455 904 aaKnown RBP22.68■■□□□ 1.22
COL11A2-204ENST00000395194 CYP2C18P33260 490 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 PPIGQ13427 754 aaKnown RBP eCLIP22.68■■□□□ 1.22
COL11A2-204ENST00000395194 TAPT1Q6NXT6 567 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 BTNL9Q6UXG8 535 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 KIAA1211Q6ZU35 1233 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 MYH6P13533 1939 aa22.68■■□□□ 1.22
COL11A2-204ENST00000395194 PDHBP11177 359 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 FOSL2P15408 326 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 DNAJB2P25686 324 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 PSMC6P62333 389 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 MFSD6Q6ZSS7 791 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 C16orf59Q7L2K0 433 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 ZKSCAN3Q9BRR0 538 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 TCP11L1Q9NUJ3 509 aa22.67■■□□□ 1.22
COL11A2-204ENST00000395194 ZMYM6O95789 1325 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 NEDD4P46934 1319 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 UMODL1Q5DID0 1318 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.66■■□□□ 1.22
COL11A2-204ENST00000395194 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.66■■□□□ 1.22
COL11A2-204ENST00000395194 GRXCR1A8MXD5 290 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 CALML3P27482 149 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 ALDH5A1P51649 535 aaPredicted RBP22.66■■□□□ 1.22
COL11A2-204ENST00000395194 NKX3-2P78367 333 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 ITGA7Q13683 1181 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 TMEM240Q5SV17 173 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 AKNAD1Q5T1N1 836 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 SLC30A10Q6XR72 485 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 COL25A1Q9BXS0 654 aaPredicted RBP22.66■■□□□ 1.22
COL11A2-204ENST00000395194 VTA1Q9NP79 307 aa22.66■■□□□ 1.22
COL11A2-204ENST00000395194 CD4P01730 458 aa22.65■■□□□ 1.22
COL11A2-204ENST00000395194 IQSEC1Q6DN90 963 aa22.65■■□□□ 1.22
COL11A2-204ENST00000395194 TMEM199Q8N511 208 aa22.65■■□□□ 1.22
COL11A2-204ENST00000395194 CPVLQ9H3G5 476 aa22.65■■□□□ 1.22
COL11A2-204ENST00000395194 ADD3Q9UEY8 706 aaKnown RBP22.65■■□□□ 1.22
COL11A2-204ENST00000395194 GRIN2DO15399 1336 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms