RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 FGFR2P21802 821 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 SPA17Q15506 151 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 NAALADL2Q58DX5 795 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 CCDC181Q5TID7 509 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 HAUS3Q68CZ6 603 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 CYP7A1P22680 504 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
CNP-201ENST00000393888 ZBED6P86452 979 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 NNTQ13423 1086 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 OTUD6BQ8N6M0 293 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 DUSP9Q99956 384 aaKnown RBP18.3■□□□□ 0.52
CNP-201ENST00000393888 IFIH1Q9BYX4 1025 aaKnown RBP18.3■□□□□ 0.52
CNP-201ENST00000393888 THAP9Q9H5L6 903 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 ABCF2Q9UG63 623 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 TIAM2Q8IVF5 1701 aa18.3■□□□□ 0.52
CNP-201ENST00000393888 ALS2Q96Q42 1657 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 KLRC4O43908 158 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 FAM153BP0C7A2 387 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 TROAPQ12815 778 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 FAM153CQ494X1 144 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 TTI2Q6NXR4 508 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 ZNF662Q6ZS27 426 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 CCDC170Q8IYT3 715 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 LRRC15Q8TF66 581 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 CXorf56Q9H5V9 222 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 RBM12Q9NTZ6 932 aaKnown RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 STIM2Q9P246 746 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 FAM153AQ9UHL3 310 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 PCDHA13Q9Y5I0 950 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 PSMA7O14818 248 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 TACC1O75410 805 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 SLC5A1P13866 664 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 GNAT2P19087 354 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 IBSPP21815 317 aaPredicted RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 EPHB4P54760 987 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 ANKRD40Q6AI12 368 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 FBXO41Q8TF61 875 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 IFT81Q8WYA0 676 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 CCDC43Q96MW1 224 aaKnown RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 JPH2Q9BR39 696 aaPredicted RBP18.29■□□□□ 0.52
CNP-201ENST00000393888 DISC1Q9NRI5 854 aa18.29■□□□□ 0.52
CNP-201ENST00000393888 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 EPHB6O15197 1021 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 MAP2K2P36507 400 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 KCTD19Q17RG1 926 aaPredicted RBP18.28■□□□□ 0.52
CNP-201ENST00000393888 CNPY4Q8N129 248 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 FNBP4Q8N3X1 1017 aaPredicted RBP18.28■□□□□ 0.52
CNP-201ENST00000393888 TRIM58Q8NG06 486 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 HPS3Q969F9 1004 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
CNP-201ENST00000393888 SALL4Q9UJQ4 1053 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 CNTNAP5Q8WYK1 1306 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 KIAA0754O94854 1291 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 GUCY2FP51841 1108 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 RCAN1P53805 252 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 SEC24CP53992 1094 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 TMTC3Q6ZXV5 915 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 SH2D4AQ9H788 454 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 CD248Q9HCU0 757 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 FAM207AQ9NSI2 230 aaPredicted RBP18.28■□□□□ 0.52
CNP-201ENST00000393888 ARHGAP20Q9P2F6 1191 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 NFU1Q9UMS0 254 aa18.28■□□□□ 0.52
CNP-201ENST00000393888 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
CNP-201ENST00000393888 BUB1O43683 1085 aa18.27■□□□□ 0.52
CNP-201ENST00000393888 FNTAP49354 379 aa18.27■□□□□ 0.52
CNP-201ENST00000393888 CARSP49589 748 aaKnown RBP18.27■□□□□ 0.52
CNP-201ENST00000393888 GSCP56915 257 aaPredicted RBP18.27■□□□□ 0.52
CNP-201ENST00000393888 SKOR1P84550 965 aa18.27■□□□□ 0.52
CNP-201ENST00000393888 RNF187Q5TA31 235 aaPredicted RBP18.27■□□□□ 0.52
CNP-201ENST00000393888 C8orf74Q6P047 294 aa18.27■□□□□ 0.52
CNP-201ENST00000393888 PRPF38AQ8NAV1 312 aaKnown RBP18.27■□□□□ 0.52
CNP-201ENST00000393888 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.52
CNP-201ENST00000393888 COL18A1P39060 1754 aa18.27■□□□□ 0.52
CNP-201ENST00000393888 FAM205AQ6ZU69 1335 aa18.27■□□□□ 0.51
CNP-201ENST00000393888 USO1O60763 962 aaKnown RBP18.27■□□□□ 0.51
CNP-201ENST00000393888 EIF4A3P38919 411 aaKnown RBP18.27■□□□□ 0.51
CNP-201ENST00000393888 DYNLL1P63167 89 aaKnown RBP18.27■□□□□ 0.51
CNP-201ENST00000393888 ATP2B2Q01814 1243 aa18.27■□□□□ 0.51
CNP-201ENST00000393888 C4orf32Q8N8J7 132 aa18.27■□□□□ 0.51
CNP-201ENST00000393888 UBR2Q8IWV8 1755 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 GLI1P08151 1106 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
CNP-201ENST00000393888 TRADDQ15628 312 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 MIIPQ5JXC2 388 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 NUP58Q9BVL2 599 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 NHSL1Q5SYE7 1610 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 ZNF233A6NK53 670 aa18.26■□□□□ 0.51
CNP-201ENST00000393888 MEFVO15553 781 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms