RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RAB44Q7Z6P3 723 aaPredicted RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 IGSF22Q8N9C0 903 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 FAM13CQ8NE31 585 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 PGBD4Q96DM1 585 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 BRD7Q9NPI1 651 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 SEC31BQ9NQW1 1179 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 EDARQ9UNE0 448 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 AKT3Q9Y243 479 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 IL2RAP01589 272 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 POLBP06746 335 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 EPHX1P07099 455 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 PEX2P28328 305 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 GRIK1P39086 918 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 EPHA4P54764 986 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 SEPT7Q16181 437 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZC3H12BQ5HYM0 836 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 WAPLQ7Z5K2 1190 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 PPP1R14CQ8TAE6 165 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 RHBDD1Q8TEB9 315 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 CNDP2Q96KP4 475 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 RIPOR3Q96MK2 946 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZDHHC15Q96MV8 337 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 TM9SF2Q99805 663 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 LBHD1Q9BQE6 289 aaPredicted RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZKSCAN3Q9BRR0 538 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZNF700Q9H0M5 742 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 SLC52A2Q9HAB3 445 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 SP110Q9HB58 689 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZSWIM5Q9P217 1185 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 REV1Q9UBZ9 1251 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 AASSQ9UDR5 926 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ANKRD18BA2A2Z9 1011 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 HMX3A6NHT5 357 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 HTR3BO95264 441 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 RHOQP17081 205 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 BTKQ06187 659 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 SLC45A4Q5BKX6 768 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 CEP135Q66GS9 1140 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 FBXO38Q6PIJ6 1188 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 DSTYKQ6XUX3 929 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZDHHC1Q8WTX9 485 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ACSF2Q96CM8 615 aaPredicted RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 TRIM44Q96DX7 344 aaPredicted RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 DSCC1Q9BVC3 393 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 OLA1Q9NTK5 396 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 CATSPERZQ9NTU4 200 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 COQ6Q9Y2Z9 468 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 DTNBO60941 627 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 TMCC2O75069 709 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 TBC1D8O95759 1140 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ADH1BP00325 375 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 PABPC1P11940 636 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 KRT10P13645 584 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 VCAM1P19320 739 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 NPTX2P47972 431 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 TMF1P82094 1093 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 WDR43Q15061 677 aaKnown RBP eCLIP4.08□□□□□ -1.76
XRN1-202ENST00000392981 TMEM40Q8WWA1 233 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 RUFY2Q8WXA3 655 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 BHMTQ93088 406 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 DNAI2Q9GZS0 605 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 RAD18Q9NS91 495 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 DNM3Q9UQ16 869 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 PCDHA8Q9Y5H6 950 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 A0A096LPE4 126 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 A0A1W2PPZ6 126 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ANO9A1A5B4 782 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ARHGAP33O14559 1287 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 MRPS35P82673 323 aaKnown RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 ANO6Q4KMQ2 910 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 FKBP15Q5T1M5 1219 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 TSHZ3Q63HK5 1081 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 OVOS1Q6IE37 1185 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 PLD6Q8N2A8 252 aaKnown RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 CPA6Q8N4T0 437 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 TMCO5AQ8N6Q1 288 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 PPP1R35Q8TAP8 253 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 DHRS1Q96LJ7 313 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ZWILCHQ9H900 591 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ROBO2Q9HCK4 1378 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 GREM1O60565 184 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 COL6A1P12109 1028 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 PHKG2P15735 406 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 GRK2P25098 689 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 GSTM4Q03013 218 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 NEXNQ0ZGT2 675 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 BLMHQ13867 455 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ZNF174Q15697 407 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 MSS51Q4VC12 460 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 EPM2AIP1Q7L775 607 aaPredicted RBP4.07□□□□□ -1.76
XRN1-202ENST00000392981 NLRC3Q7RTR2 1065 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 DAAM2Q86T65 1068 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 ESX1Q8N693 406 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 C2orf69Q8N8R5 385 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 HVCN1Q96D96 273 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 FAXDC2Q96IV6 333 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 RADILQ96JH8 1075 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 BLOC1S4Q9NUP1 217 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
XRN1-202ENST00000392981 DCDC2CA8MYV0 355 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms